Reactome | ZBED1 [nucleoplasm]

ZBED1 [nucleoplasm]

Stable Identifier

R-HSA-8956376

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

nucleoplasm

Synonyms

Zinc finger BED domain-containing protein 1, ZBED1_HUMAN

Locations in the PathwayBrowser

Expand all

External Reference Information

External Reference

UniProt:O96006 ZBED1

Gene Names

ZBED1, ALTE, DREF, hDREF, KIAA0785, TRAMP

Chain

chain:1-694

Reference Genes

BioGPS Gene:9189 ZBED1

COSMIC (genes):ZBED1 ZBED1

CTD Gene:9189 ZBED1

dbSNP Gene:9189 ZBED1

ENSEMBL:ENSG00000214717 ZBED1

ENSEMBL:ENSG00000214717.12 ZBED1

HGNC:447 ZBED1

KEGG Gene (Homo sapiens):9189 ZBED1

Monarch:9189 ZBED1

NCBI Gene:9189 ZBED1

OMIM:300178 ZBED1

UCSC:O96006 ZBED1

Reference Transcript

Other Identifiers

11718794_at

11749013_x_at

1554821_PM_a_at

1554821_a_at

203043_PM_at

203043_at

39168_at

3997567

3997568

3997569

3997570

3997571

3997574

3997575

3997576

4033358

4033359

4033360

4033361

4033362

4033364

4033365

44978_at

8171139

8177029

9189

A_23_P217507

A_32_P86623

A_33_P3398840

GE53488

GO:0000785

GO:0000978

GO:0000981

GO:0001228

GO:0003677

GO:0003712

GO:0003713

GO:0003824

GO:0005515

GO:0005634

GO:0005635

GO:0005654

GO:0005694

GO:0005813

GO:0005815

GO:0005856

GO:0006351

GO:0006355

GO:0006357

GO:0016605

GO:0016740

GO:0016925

GO:0019789

GO:0031965

GO:0036211

GO:0042802

GO:0043226

GO:0043565

GO:0044828

GO:0045944

GO:0046872

GO:0046983

GO:0061665

GO:0140096

GO:0140110

GO:1990466

GO:1990837

HMNXSV003034179

Hs2.9933.2.S1_3p_x_at

ILMN_1694466

PH_hs_0026388

TC0Y000287.hg

g4759257_3p_at

Inferred To

ZBED1 [nucleoplasm] (Caenorhabditis elegans)

zbed1 [nucleoplasm] (Xenopus tropicalis)

Homologues of ZBED1 [nucleoplasm] (Caenorhabditis elegans)

Homologues of ZBED1 [nucleoplasm] (Xenopus tropicalis)

LOC105945140 [nucleoplasm] (Xenopus tropicalis)

Cross References

RefSeq

NP_001164607.1, NP_001164606.1, NP_004720.1

OpenTargets

ENSG00000214717

HPA

ENSG00000214717-ZBED1

GeneCards

O96006

Ensembl

ENST00000652001, ENST00000381223, ENSP00000370616, ENST00000381222, ENSG00000214717, ENSP00000370621, ENSP00000370620, ENST00000381218, ENSP00000498725

PRO

O96006

Pharos - Targets

O96006

PDB

2CT5

Interactors (47)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:Q9NX04 CA109			0.781	7
UniProt:Q5JVL4 EFHC1			0.718	6
UniProt:Q7KZS0 Q7KZS0			0.718	6
UniProt:Q8TCA0 LRC20			0.718	6
UniProt:O96006 ZBED1	1	ZBED1 [nucleoplasm] (R-HSA-8956376)	0.666	4
UniProt:O60341 KDM1A	1	KDM1A [nucleoplasm] (R-HSA-996769)	0.666	4
UniProt:P07602 PSAP	10	PSAP(60-142) [extracellular region] (R-HSA-351338) PSAP(17-524) [plasma membrane] (R-HSA-6806262) PSAP(17-524) [azurophil granule membrane] (R-HSA-6799212) PSAP(405-486) [lysosomal lumen] (R-HSA-9840328) PSAP(311-391) [lysosomal membrane] (R-HSA-1605602) PSAP(60-142) [lysosomal lumen] (R-HSA-351333) PSAP [lysosomal lumen] (R-HSA-9840325) PSAP(195-273) [lysosomal lumen] (R-HSA-9840336) PSAP(326-340) [extracellular region] (R-HSA-5336179) PSAP(?-?) [extracellular region] (R-HSA-5336190)	0.666	4
UniProt:P56282 POLE2	1	POLE2 [nucleoplasm] (R-HSA-68482)	0.556	3
UniProt:Q8IYE1 CCD13			0.556	3
UniProt:P40454 PTPA1			0.556	3
UniProt:P17157 PHO85			0.556	3
UniProt:Q8N7C3 TRIMM			0.556	3
UniProt:Q9Y5K5 UCHL5	2	UCHL5 [nucleoplasm] (R-HSA-5689584) UCHL5 [cytosol] (R-HSA-1629778)	0.556	3
UniProt:Q9UBB6 NCDN			0.556	3
UniProt:P0DI81-3 TRAPPC2			0.556	3
UniProt:Q9H5Z6-2 FAM124B			0.556	3
UniProt:P38340 NTM1			0.556	3
UniProt:Q13671 RIN1	1	RIN1 [cytosol] (R-HSA-8875287)	0.556	3
UniProt:Q16543 CDC37	1	CDC37 [cytosol] (R-HSA-1221609)	0.556	3
UniProt:Q9UBT7 CTNL1			0.556	3
UniProt:Q16385 SSX2			0.556	3
UniProt:Q13131 PRKAA1	3	p-T183-PRKAA1 [nucleoplasm] (R-HSA-2151206) p-T183-PRKAA1 [cytosol] (R-HSA-380964) PRKAA1 [cytosol] (R-HSA-380935)	0.556	3
UniProt:Q9Y2J4-4 AMOTL2			0.556	3
UniProt:Q9BVV2 FND11			0.556	3
UniProt:P32502	1	GCD7 [cytosol] (R-SCE-72519)	0.556	3
UniProt:P80188 LCN2	2	LCN2 [specific granule lumen] (R-HSA-6799614) LCN2 [extracellular region] (R-HSA-5215934)	0.556	3
UniProt:Q8TBB1 LNX1	1	LNX1 [cytosol] (R-HSA-8851641)	0.556	3
UniProt:Q07887 LDB18			0.556	3
UniProt:Q9NPJ1 MKKS	1	MKKS [cytosol] (R-HSA-5624086)	0.556	3
UniProt:Q5W5X9-3 TTC23			0.556	3
UniProt:P39518	2	ACSL1 [endoplasmic reticulum membrane] (R-SCE-201038) ACSL6 [endoplasmic reticulum membrane] (R-SCE-548687)	0.556	3
UniProt:A8K5H9 A8K5H9			0.556	3
UniProt:Q9H8Y8 GORASP2	2	GORASP2 [Golgi membrane] (R-HSA-2422385) p-T222,T225-GORASP2 [Golgi membrane] (R-HSA-2422965)	0.556	3
UniProt:P25325 MPST	2	CysS248-MPST [mitochondrial matrix] (R-HSA-9034913) MPST [mitochondrial matrix] (R-HSA-9012720)	0.556	3
UniProt:A0A024R8L2 A0A024R8L2			0.556	3
UniProt:Q9BVG8-5 KIFC3			0.556	3
UniProt:Q9BVM4 GGACT			0.556	3
UniProt:O15479 MAGB2			0.556	3
UniProt:Q96HA8 NTAQ1			0.556	3
UniProt:Q9NRD5 PICK1	2	PICK1 [plasma membrane] (R-HSA-416989) PICK1 [endocytic vesicle membrane] (R-HSA-417017)	0.556	3
UniProt:O75604 USP2	2	USP2 [nucleoplasm] (R-HSA-5689946) USP2 [cytosol] (R-HSA-5212661)	0.556	3
UniProt:O15160 POLR1C	2	POLR1C [nucleoplasm] (R-HSA-63498) POLR1C [cytosol] (R-HSA-1964454)	0.556	3
UniProt:Q9UI95 MAD2L2	1	MAD2L2 [nucleoplasm] (R-HSA-59092)	0.556	3
UniProt:P26367 PAX6	1	PAX6 [nucleoplasm] (R-HSA-3009044)	0.556	3
UniProt:O75928 PIAS2	1	PIAS2 [nucleoplasm] (R-HSA-2993787)	0.556	3
UniProt:O15287 FANCG	2	FANCG [cytosol] (R-HSA-420788) FANCG [nucleoplasm] (R-HSA-419532)	0.553	2
UniProt:P10644 PRKAR1A	4	PRKAR1A(1-183)-p-7Y-ALK(1058-1620) fusion [cytosol] (R-HSA-9713476) PRKAR1A(1-183)-ALK(1058-1620) fusion [cytosol] (R-HSA-9713471) PRKAR1A [ciliary base] (R-HSA-5610408) PRKAR1A [cytosol] (R-HSA-57836)	0.547	2

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