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RPRD1B [nucleoplasm]
Stable Identifier
R-HSA-6814894
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Regulation of nuclear pre-mRNA domain-containing protein 1B, RPR1B_HUMAN
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
RNA polymerase II transcribes snRNA genes (Homo sapiens)
CBCAP complex binds 7-methylguanosine cap of snRNA (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
Dephosphorylation and dissociation of RNA polymerase II at 3' end of snRNA gene (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
Integrator complex processes the 3' end of snRNA (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
Pre-snRNA is elongated and capped with 7-methylguanosine (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RDRP1A,B:RDRP2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
Pre-snRNA transcript initiation, Integrator binding, LEC binding (Homo sapiens)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RDRP1A,B:RDRP2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RPRD1A,B:RPRD2:RPAP2 [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain (Homo sapiens)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RPRD1A,B:RPRD2:RPAP2 [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9NQG5 RPRD1B
Gene Names
RPRD1B, C20orf77, CREPT
Chain
initiator methionine:, chain:2-326
Reference Genes
BioGPS Gene:58490 RPRD1B
COSMIC (genes):RPRD1B RPRD1B
CTD Gene:58490 RPRD1B
dbSNP Gene:58490 RPRD1B
ENSEMBL:ENSG00000101413 RPRD1B
HGNC:16209 RPRD1B
KEGG:hsa:58490 RPRD1B
Monarch:58490 RPRD1B
NCBI Gene:58490 RPRD1B
OMIM:614694 RPRD1B
UCSC:Q9NQG5 RPRD1B
Reference Transcript
RefSeq:NM_021215.3 RPRD1B
Other Identifiers
11718279_at
11747127_a_at
16913493
225024_PM_at
225024_at
3884452
3884453
3884454
3884455
3884456
3884457
3884459
3884460
3884464
3884465
3884467
3884468
3884469
3884471
3884475
3884476
3884478
3884479
3884480
3884483
3884484
3884485
3884488
51150_at
58490
8062433
88772_at
A_14_P123728
A_14_P139876
A_23_P91207
A_24_P250499
GE56491
GO:0000993
GO:0001111
GO:0003824
GO:0005515
GO:0005634
GO:0005654
GO:0006355
GO:0006357
GO:0008284
GO:0008420
GO:0010564
GO:0016071
GO:0016787
GO:0031124
GO:0042802
GO:0043226
GO:0045944
GO:0097550
GO:0099122
GO:0140096
HMNXSV003014181
HMNXSV003046390
Hs.27192.1.S2_3p_at
Hs.27192.1.S2_3p_x_at
ILMN_1765400
PH_hs_0023405
TC20000278.hg
Participates
as a member of
RPRD1A,B [nucleoplasm] (Homo sapiens)
Inferred To
RTT103 [nucleoplasm]
(Saccharomyces cerevisiae)
cids-1 [nucleoplasm]
(Caenorhabditis elegans)
Dmel\CG9018 [nucleoplasm]
(Drosophila melanogaster)
RPRD1B [nucleoplasm]
(Bos taurus)
RPRD1B [nucleoplasm]
(Canis familiaris)
RPRD1B [nucleoplasm]
(Schizosaccharomyces pombe)
RPRD1B [nucleoplasm]
(Sus scrofa)
Rprd1b [nucleoplasm]
(Mus musculus)
Rprd1b [nucleoplasm]
(Rattus norvegicus)
CREPT [nucleoplasm]
(Gallus gallus)
rprd1b [nucleoplasm]
(Xenopus tropicalis)
Cross References
ENSEMBL
ENSG00000101413
,
ENST00000373433
,
ENSP00000362532
OpenTargets
ENSG00000101413
GeneCards
RPRD1B
HPA
ENSG00000101413-RPRD1B
PRO
Q9NQG5
Pharos - Targets
Q9NQG5
GlyGen
Q9NQG5
PDB
4HFG
,
4Q94
,
4Q96
,
4FLA
,
4NAD
,
9B9L
,
4FU3
Interactors (15)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q8IXW5 RPAP2
1
RPAP2 [nucleoplasm]
(R-HSA-6810227)
0.757
6
UniProt:P19388 POLR2E
2
POLR2E [cytosol]
(R-HSA-1964438)
POLR2E [nucleoplasm]
(R-HSA-83713)
0.643
3
UniProt:P20618 PSMB1
7
PSMB1 [cytosol]
(R-HSA-68738)
PSMB1 [nucleoplasm]
(R-HSA-174347)
pro-PSMB1 [cytosol]
(R-HSA-9908139)
PSMB1(1-28) [cytosol]
(R-HSA-9908143)
PSMB1 [ficolin-1-rich granule lumen]
(R-HSA-6803340)
PSMB1 [extracellular region]
(R-HSA-6806477)
PSMB1 [secretory granule lumen]
(R-HSA-6803287)
0.556
3
UniProt:Q9H5V9 STEEP1
1
STEEP1 [nucleoplasm]
(R-HSA-9769596)
0.556
3
UniProt:P09017 HOXC4
1
HOXC4 [nucleoplasm]
(R-HSA-5617871)
0.556
3
UniProt:Q7KZ85 SUPT6H
1
SUPT6H [nucleoplasm]
(R-HSA-8932908)
0.527
3
UniProt:P62875 POLR2L
2
POLR2L [cytosol]
(R-HSA-1964467)
POLR2L [nucleoplasm]
(R-HSA-83715)
0.527
3
UniProt:O96019 ACTL6A
1
ACTL6A [nucleoplasm]
(R-HSA-2980912)
0.527
2
UniProt:P02675 FGB
5
FGB [extracellular region]
(R-HSA-140584)
FGB(31-44) [extracellular region]
(R-HSA-140876)
FGB [plasma membrane]
(R-HSA-140917)
FGB(31-491) [extracellular region]
(R-HSA-140846)
FGB(31-491) [platelet alpha granule lumen]
(R-HSA-140921)
0.527
2
UniProt:P61218 POLR2F
2
POLR2F [cytosol]
(R-HSA-1964441)
POLR2F [nucleoplasm]
(R-HSA-83714)
0.527
4
UniProt:Q5VT52 RPRD2
1
RPRD2 [nucleoplasm]
(R-HSA-6814906)
0.527
3
UniProt:Q8WVK2 SNRNP27
1
SNRNP27 [nucleoplasm]
(R-HSA-6806778)
0.527
2
UniProt:O00267 SUPT5H
1
p-SUPT5H [nucleoplasm]
(R-HSA-3009372)
0.527
2
UniProt:Q9Y3F4 STRAP
1
STRAP [cytosol]
(R-HSA-2127556)
0.527
2
UniProt:P13569 CFTR
17
misfolded CFTR [endoplasmic reticulum membrane]
(R-HSA-8868730)
CFTR [endoplasmic reticulum membrane]
(R-HSA-8866837)
CFTR [plasma membrane]
(R-HSA-383188)
CFTR N1303K [plasma membrane]
(R-HSA-5678983)
CFTR F508del [plasma membrane]
(R-HSA-5678978)
CFTR W1282* [plasma membrane]
(R-HSA-5678976)
CFTR G551D [plasma membrane]
(R-HSA-5678977)
CFTR G542* [plasma membrane]
(R-HSA-5678986)
ub-CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866842)
ub-CFTR F508del [cytosol]
(R-HSA-8866838)
CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866834)
PolyUb-CFTR [endosome membrane]
(R-HSA-6782976)
CFTR [endosome membrane]
(R-HSA-6782965)
CFTR [Golgi-associated vesicle membrane]
(R-HSA-5627079)
CFTR [lysosomal membrane]
(R-HSA-5627279)
PolyUb-CFTR [plasma membrane]
(R-HSA-8867595)
PolyUb-CFTR [clathrin-coated endocytic vesicle membrane]
(R-HSA-8869104)
0.483
7
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