Reactome | Activin/Nodal signaling controls divergent transcriptional networks in human embryonic stem cells and in endoderm progenitors

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Activin/Nodal signaling controls divergent transcriptional networks in human embryonic stem cells and in endoderm progenitors Show undefined attributes

author	[Person:2888936] Brown, S [Person:2888938] Teo, A [Person:2888941] Pauklin, S [Person:2888932] Hannan, N [Person:2888935] Cho, CH [Person:2888945] Lim, B [Person:2888937] Vardy, L [Person:2888947] Dunn, NR [Person:2888942] Trotter, M [Person:2888948] Pedersen, R [Person:2888949] Vallier, L
created	[InstanceEdit:2888929] May, B, 2012-12-31
dbId	2888922
displayName	Activin/Nodal signaling controls divergent transcriptional networks in human embryonic stem cells and in endoderm progenitors
journal	Stem Cells
pages	1176-85
pubMedIdentifier	21630377
schemaClass	LiteratureReference
title	Activin/Nodal signaling controls divergent transcriptional networks in human embryonic stem cells and in endoderm progenitors
url	http://www.ncbi.nlm.nih.gov/pubmed/21630377
volume	29
year	2011

Referrals

(literatureReference)

[BlackBoxEvent:R-HSA-9823950] Expression of CXCR4 in definitive endoderm
[RegulationReference:9824491] Positive gene expression regulation by 'EOMES:p-2S-SMAD2,3:SMAD4:GATA6:CXCR4 gene [nucleoplasm]' Activin/Nodal signaling controls divergent transcriptional networks in human embryonic stem cells and in endoderm progenitors
[BlackBoxEvent:R-HSA-9823992] Expression of GSC in definitive endoderm
[RegulationReference:9823978] Positive gene expression regulation by 'EOMES:p-2S-SMAD2,3:SMAD4:MIXL1:GSC gene [nucleoplasm]' Activin/Nodal signaling controls divergent transcriptional networks in human embryonic stem cells and in endoderm progenitors
[Reaction:R-HSA-9823966] EOMES, SMAD2,3, MIXL1 bind the GSC gene
[Reaction:R-HSA-9823952] EOMES, SMAD2,3, and GATA6 bind the CXCR4 gene
[Complex:R-HSA-9823975] EOMES:p-2S-SMAD2,3:SMAD4:GATA6:CXCR4 gene [nucleoplasm]
[BlackBoxEvent:R-HSA-9823729] Expression of SOX17 in definitive endoderm
[Reaction:R-HSA-9824472] TCF7L2:CTNNB1, EOMES, TBXT, MIXL1, SMAD2,3, FOXA2, GATA4, and GATA6 bind the SOX17 gene
[BlackBoxEvent:R-HSA-9823849] Expression of GATA4 in definitive endoderm
[Reaction:R-HSA-9823836] SMAD2,3, FOXA2, TBXT, and GATA6 bind the GATA4 gene
[RegulationReference:9824495] Positive gene expression regulation by 'TCF7L2:CTNNB1:EOMES:TBXT:p-2S-SMAD2,3:SMAD4:FOXA2:GATA4:GATA6,SOX17 gene [nucleoplasm]' Activin/Nodal signaling controls divergent transcriptional networks in human embryonic stem cells and in endoderm progenitors
[Complex:R-HSA-9823744] TCF7L2:CTNNB1:EOMES:TBXT:MIXL1:p-2S-SMAD2,3:SMAD4:FOXA2:GATA4:GATA6,SOX17 gene [nucleoplasm]
[BlackBoxEvent:R-HSA-9823989] Expression of FOXA2 in definitive endoderm
[Reaction:R-HSA-9823958] EOMES, TBXT (T BRACHYURY), GATA6, and SMAD2,3 bind the FOXA2 gene
[BlackBoxEvent:R-HSA-9823977] Expression of GATA6 in definitive endoderm
[Reaction:R-HSA-9823959] SMAD2,3 and GATA6-AS1 lncRNA bind the GATA6 gene
[RegulationReference:9824485] Positive gene expression regulation by 'p-2S-SMAD2,3:GATA6 gene [nucleoplasm]' Activin/Nodal signaling controls divergent transcriptional networks in human embryonic stem cells and in endoderm progenitors
[Complex:R-HSA-9823969] p-2S-SMAD2,3:GATA6-AS1 lncRNA:GATA6 gene [nucleoplasm]
[RegulationReference:9823973] Positive gene expression regulation by 'EOMES:p-2S-SMAD2,3:SMAD4:GATA6:FOXA2 gene [nucleoplasm]' Activin/Nodal signaling controls divergent transcriptional networks in human embryonic stem cells and in endoderm progenitors
[Complex:R-HSA-9823963] EOMES:TBXT:GATA6:p-2S-SMAD2,3:SMAD4:FOXA2 gene [nucleoplasm]
[BlackBoxEvent:R-HSA-452838] Expression of NANOG
[Reaction:R-HSA-480204] POU5F1 (OCT4), SOX2, NANOG, KLF4, PBX1, SMAD2 bind the NANOG promoter
[Reaction:R-HSA-1112609] POU5F1 (OCT4), SOX2, NANOG, ZSCAN10, PRDM14, SMAD2, FOXP1-ES bind the POU5F1 (OCT4) promoter
[Complex:R-HSA-1112611] POU5F1:SOX2:NANOG:ZSCAN10:PRDM14:SMAD2:SALL4:FOXP1-ES:POU5F1 gene [nucleoplasm]
[RegulationReference:9641771] Positive gene expression regulation by 'POU5F1:SOX2:NANOG:KLF4:PBX1:SMAD2:FOXP1-ES:NANOG gene [nucleoplasm]' Core transcriptional regulatory circuitry in human embryonic stem cells
[Complex:R-HSA-480463] POU5F1:SOX2:NANOG:KLF4:PBX1:SMAD2:FOXP1-ES:NANOG gene [nucleoplasm]

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