Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
LSM3 [cytosol]
Stable Identifier
R-HSA-429894
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
cytosol
Synonyms
U6 snRNA-associated Sm-like protein LSm3, LSM3_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Deadenylation-dependent mRNA decay (Homo sapiens)
mRNA decay by 5' to 3' exoribonuclease (Homo sapiens)
5' to 3' exoribonuclease hydrolyzes decapped mRNA (Homo sapiens)
Decapped mRNA:LSM1-7 Complex [cytosol] (Homo sapiens)
Lsm1-7 Complex [cytosol] (Homo sapiens)
LSM3 [cytosol] (Homo sapiens)
Lsm1-7 Complex [cytosol] (Homo sapiens)
LSM3 [cytosol] (Homo sapiens)
DCP1-DCP2 complex decaps mRNA (Homo sapiens)
Deadenylated mRNA:Lsm1-7 Complex [cytosol] (Homo sapiens)
Lsm1-7 Complex [cytosol] (Homo sapiens)
LSM3 [cytosol] (Homo sapiens)
Decapped mRNA:LSM1-7 Complex [cytosol] (Homo sapiens)
Lsm1-7 Complex [cytosol] (Homo sapiens)
LSM3 [cytosol] (Homo sapiens)
Lsm1-7 Complex binds deadenylated mRNA (Homo sapiens)
Deadenylated mRNA:Lsm1-7 Complex [cytosol] (Homo sapiens)
Lsm1-7 Complex [cytosol] (Homo sapiens)
LSM3 [cytosol] (Homo sapiens)
Lsm1-7 Complex [cytosol] (Homo sapiens)
LSM3 [cytosol] (Homo sapiens)
External Reference Information
External Reference
UniProt:P62310 LSM3
Gene Names
LSM3, MDS017
Chain
initiator methionine:, chain:2-102
Reference Genes
BioGPS Gene:27258 LSM3
COSMIC (genes):LSM3 LSM3
CTD Gene:27258 LSM3
dbSNP Gene:27258 LSM3
ENSEMBL:ENSG00000170860 LSM3
ENSEMBL_homo_sapiens_GENE:ENSG00000170860.4 LSM3
HGNC:17874 LSM3
KEGG Gene (Homo sapiens):27258 LSM3
Monarch:27258 LSM3
NCBI Gene:27258 LSM3
OMIM:607283 LSM3
UCSC:P62310 LSM3
Reference Transcript
RefSeq:NM_014463.2 LSM3
Other Identifiers
11716311_x_at
11753808_s_at
11753809_x_at
11757092_s_at
16937930
202209_PM_at
202209_at
236363_PM_at
236363_at
2562120
2611820
2611822
2611824
2611825
2611826
2611828
2611830
2611832
27258
39009_at
8078008
88333_at
A_14_P201409
A_23_P132863
A_23_P421563
A_24_P29001
A_33_P3792328
GE61318
GE706003
GO:0000398
GO:0000932
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005681
GO:0005688
GO:0005829
GO:0006397
GO:0008380
GO:0016071
GO:0030629
GO:0032991
GO:0033962
GO:0043226
GO:0046540
GO:0071005
GO:0071011
GO:0071013
GO:0120115
GO:1990726
GO:1990904
HMNXSV003013641
HMNXSV003049961
Hs.5020.0.A1_3p_at
ILMN_1719032
ILMN_2229242
PH_hs_0036881
PH_hs_0037646
TC03000085.hg
TC03002231.hg
g7657314_3p_at
p26226
Participates
as a component of
Lsm1-7 Complex [cytosol] (Homo sapiens)
Other forms of this molecule
LSM3 [nucleoplasm]
Inferred To
Ghost homologue of LSM3 [cytosol]
(Danio rerio)
LSm3 [cytosol]
(Drosophila melanogaster)
Lsm3 [cytosol]
(Mus musculus)
Lsm3 [cytosol]
(Rattus norvegicus)
lsm-3 [cytosol]
(Caenorhabditis elegans)
lsm3 [cytosol]
(Dictyostelium discoideum)
lsm3 [cytosol]
(Schizosaccharomyces pombe)
lsm3 [cytosol]
(Xenopus tropicalis)
LSM3 [cytosol]
(Bos taurus)
LSM3 [cytosol]
(Canis familiaris)
LSM3 [cytosol]
(Gallus gallus)
LSM3 [cytosol]
(Plasmodium falciparum)
LSM3 [cytosol]
(Saccharomyces cerevisiae)
LSM3 [cytosol]
(Sus scrofa)
Cross References
RefSeq
NP_055278.1
OpenTargets
ENSG00000170860
GeneCards
P62310
HPA
ENSG00000170860-LSM3
Ensembl
ENSG00000170860
,
ENST00000306024
,
ENSP00000302160
PRO
P62310
Pharos - Targets
P62310
PDB
6AHD
,
6AH0
,
6QX9
,
6QW6
,
5O9Z
,
3JCR
,
7ABG
Interactors (5)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P62318 SNRPD3
3
2xMe-SNRPD3 [nucleoplasm]
(R-HSA-192219)
SNRPD3 [nucleoplasm]
(R-HSA-71903)
2xMe-SNRPD3 [cytosol]
(R-HSA-191781)
0.742
5
UniProt:Q14145 KEAP1
3
Ub-KEAP1 [cytosol]
(R-HSA-6782766)
ub-KEAP1 [cytosol]
(R-HSA-9766647)
KEAP1 [cytosol]
(R-HSA-976038)
0.718
6
UniProt:P67809 YBX1
5
p-S32,S36-YBX1 [nucleoplasm]
(R-HSA-9733227)
p-S32,S36-YBX1 [cytosol]
(R-HSA-9736837)
YBX1 [cytosol]
(R-HSA-9736840)
YBX1 [nucleoplasm]
(R-HSA-72041)
YBX1 [extracellular region]
(R-HSA-9017791)
0.573
2
UniProt:P62306 SNRPF
2
SNRPF [nucleoplasm]
(R-HSA-71907)
SNRPF [cytosol]
(R-HSA-191852)
0.556
3
UniProt:Q9UBB9 TFIP11
1
TFIP11 [nucleoplasm]
(R-HSA-8869310)
0.488
2
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text