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THUMPD1 [nucleoplasm]
Stable Identifier
R-HSA-6791004
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
THUMP domain-containing protein 1, THUM1_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
rRNA processing (Homo sapiens)
rRNA processing in the nucleus and cytosol (Homo sapiens)
rRNA modification in the nucleus and cytosol (Homo sapiens)
NAT10 acetylates cytidine-1337 and cytidine-1842 of 18S rRNA yielding 4-acetylcytidine-1377 and 4-acetylcytidine-1842 (Homo sapiens)
NAT10:THUMPD1 [nucleoplasm] (Homo sapiens)
THUMPD1 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9NXG2 THUMPD1
Gene Names
THUMPD1
Chain
initiator methionine:, chain:2-353
Reference Genes
BioGPS Gene:55623 THUMPD1
COSMIC (genes):THUMPD1 THUMPD1
CTD Gene:55623 THUMPD1
dbSNP Gene:55623 THUMPD1
ENSEMBL:ENSG00000066654 THUMPD1
HGNC:23807 THUMPD1
Monarch:55623 THUMPD1
NCBI Gene:55623 THUMPD1
OMIM:616662 THUMPD1
UCSC:Q9NXG2 THUMPD1
Reference Transcript
RefSeq:XM_017023433.1 THUMPD1
RefSeq:NM_017736.4 THUMPD1
RefSeq:NM_001304550.1 THUMPD1
Other Identifiers
11725967_a_at
11725968_s_at
11725969_a_at
16824681
206555_PM_s_at
206555_s_at
213025_PM_at
213025_at
3683775
3683784
3683785
3683786
3683787
3683788
3683789
3683790
3683791
3683792
3683793
3683796
3683797
3683798
40617_at
40868_at
55623
8000003
A_23_P118327
A_24_P90878
A_24_P99371
GE82215
GO:0003723
GO:0005515
GO:0005654
GO:0006399
GO:0006400
HMNXSV003027583
HMNXSV003039665
Hs.268371.1.A1_3p_at
ILMN_1702946
ILMN_2108339
PH_hs_0013727
TC16000930.hg
TC16001799.hg
g8923246_3p_a_at
Participates
as a component of
NAT10:THUMPD1 [nucleoplasm] (Homo sapiens)
Cross References
ENSEMBL
ENST00000396083
,
ENST00000381337
,
ENSP00000370741
,
ENST00000636554
,
ENSP00000490841
,
ENSP00000379392
OpenTargets
ENSG00000066654
HPA
ENSG00000066654-THUMPD1
PRO
Q9NXG2
Pharos - Targets
Q9NXG2
GlyGen
Q9NXG2
PDB
2DIR
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q96PZ0 PUS7
1
PUS7 [nucleoplasm]
(R-HSA-6786515)
0.527
4
UniProt:P67809 YBX1
5
p-S32,S36-YBX1 [nucleoplasm]
(R-HSA-9733227)
p-S32,S36-YBX1 [cytosol]
(R-HSA-9736837)
YBX1 [cytosol]
(R-HSA-9736840)
YBX1 [nucleoplasm]
(R-HSA-72041)
YBX1 [extracellular region]
(R-HSA-9017791)
0.527
3
UniProt:P51884 LUM
12
LUM [extracellular region]
(R-HSA-2466189)
KS(2)-LUM [lysosomal lumen]
(R-HSA-2046283)
LUM [lysosomal lumen]
(R-HSA-2104998)
KS(2)-LUM [extracellular region]
(R-HSA-2046202)
KS(1)-LUM [Golgi lumen]
(R-HSA-2046161)
KS(2)-LUM [Golgi lumen]
(R-HSA-2046249)
Keratan(4)-LUM [Golgi lumen]
(R-HSA-2046205)
Keratan(3)-LUM [Golgi lumen]
(R-HSA-2046198)
Keratan(2)-LUM [Golgi lumen]
(R-HSA-2046233)
Keratan(1)-LUM [Golgi lumen]
(R-HSA-2046316)
Gal-glycan LUM [Golgi lumen]
(R-HSA-2046248)
N-glycan LUM [Golgi lumen]
(R-HSA-2046297)
0.527
2
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