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N-glycan LUM [Golgi lumen]
Stable Identifier
R-HSA-2046297
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
Golgi lumen
Synonyms
Lumican, LUM_HUMAN, LUM
Locations in the PathwayBrowser
Expand all
Disease (Homo sapiens)
Diseases of metabolism (Homo sapiens)
Diseases of glycosylation (Homo sapiens)
Diseases associated with glycosaminoglycan metabolism (Homo sapiens)
Defective B4GALT1 causes B4GALT1-CDG (CDG-2d) (Homo sapiens)
Defective B4GALT1 does not transfer Gal to the N-glycan precursor (Homo sapiens)
N-glycan-protein [Golgi lumen] (Homo sapiens)
N-glycan LUM [Golgi lumen] (Homo sapiens)
Metabolism (Homo sapiens)
Metabolism of carbohydrates (Homo sapiens)
Glycosaminoglycan metabolism (Homo sapiens)
Keratan sulfate/keratin metabolism (Homo sapiens)
Keratan sulfate biosynthesis (Homo sapiens)
B4GALTs transfer Gal to the N-glycan precursor (Homo sapiens)
N-glycan-protein [Golgi lumen] (Homo sapiens)
N-glycan LUM [Golgi lumen] (Homo sapiens)
External Reference Information
External Reference
UniProt:P51884 LUM
Gene Names
LUM, LDC, SLRR2D
Chain
signal peptide:1-18, chain:19-338
Reference Genes
BioGPS Gene:4060 LUM
COSMIC (genes):LUM LUM
CTD Gene:4060 LUM
dbSNP Gene:4060 LUM
ENSEMBL:ENSG00000139329 LUM
HGNC:6724 LUM
KEGG Gene (Homo sapiens):4060 LUM
Monarch:4060 LUM
NCBI Gene:4060 LUM
OMIM:600616 LUM
UCSC:P51884 LUM
Reference Transcript
RefSeq:NM_002345.3 LUM
Other Identifiers
0006650242
11715796_s_at
16768406
201744_s_at
229554_at
3465249
3465250
3465251
3465252
3465253
3465254
3465257
3465258
3465259
3465260
38038_at
4060
52570_at
7965403
A_23_P99063
A_24_P270279
GE79985
GE88676
GO:0003674
GO:0005198
GO:0005201
GO:0005515
GO:0005518
GO:0005575
GO:0005576
GO:0005583
GO:0005615
GO:0005622
GO:0005737
GO:0005764
GO:0005773
GO:0005794
GO:0005796
GO:0006790
GO:0007601
GO:0008150
GO:0009056
GO:0009058
GO:0014070
GO:0018146
GO:0030021
GO:0030198
GO:0030199
GO:0031012
GO:0032914
GO:0032991
GO:0034641
GO:0042340
GO:0043202
GO:0043226
GO:0044281
GO:0045944
GO:0048856
GO:0050877
GO:0051216
GO:0062023
GO:0070062
GO:0070848
Hs.79914.1.A1_3p_at
ILMN_1790529
ILMN_2167805
PH_hs_0024678
PH_hs_0040682
TC12001803.hg
U21128_at
g4505046_3p_a_at
Participant Of
hasMember
N-glycan-protein [Golgi lumen]
Other forms of this molecule
LUM [extracellular region]
KS(2)-LUM [extracellular region]
KS(2)-LUM [lysosomal lumen]
LUM [lysosomal lumen]
KS(1)-LUM [Golgi lumen]
KS(2)-LUM [Golgi lumen]
Keratan(4)-LUM [Golgi lumen]
Keratan(3)-LUM [Golgi lumen]
Keratan(2)-LUM [Golgi lumen]
Gal-glycan LUM [Golgi lumen]
Keratan(1)-LUM [Golgi lumen]
Inferred To
LUM [Golgi lumen] (Bos taurus)
LUM [Golgi lumen] (Canis familiaris)
LUM [Golgi lumen] (Gallus gallus)
LUM [Golgi lumen] (Sus scrofa)
DS05899.7 [Golgi lumen] (Drosophila melanogaster)
lum [Golgi lumen] (Danio rerio)
lum [Golgi lumen] (Xenopus tropicalis)
Lum [Golgi lumen] (Mus musculus)
Lum [Golgi lumen] (Rattus norvegicus)
Modified Residues
Name
N4-(N-acetylamino)glucosyl-L-asparagine (ChEBI:63488) at unknown position
Modification
beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->3)-[beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAcl-(1->4)-beta-D-GlcNAc-yl group
PsiMod Name
N4-(N-acetylamino)glucosyl-L-asparagine
PsiMod Definition
A protein modification that effectively converts an L-asparagine residue to N4-(N-acetylaminoglucosyl)-L-asparagine.
Cross References
RefSeq
NP_002336.1
Target Pathogen
5b354852be737e166372e9a7
OpenTargets
ENSG00000139329
HPA
ENSG00000139329-LUM
GeneCards
P51884
Ensembl
ENST00000266718
,
ENSG00000139329
,
ENSP00000266718
PRO
P51884
Orphanet
28194
Interactors (6)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P50281 MMP14
3
MMP14(21-582) [Golgi lumen]
(R-HSA-1604689)
MMP14 [plasma membrane]
(R-HSA-1442472)
MMP14 [Golgi lumen]
(R-HSA-1604724)
0.558
2
UniProt:P61981 YWHAG
1
YWHAG [cytosol]
(R-HSA-380312)
0.556
3
UniProt:P17252 PRKCA
8
p-T497,T638,S657-PRKCA [nucleoplasm]
(R-HSA-5223292)
PRKCA [cytosol]
(R-HSA-58196)
p-T497-PRKCA [cytosol]
(R-HSA-5218731)
p-T497,T638,S657-PRKCA [cytosol]
(R-HSA-4332337)
pT497,T638,S657-PRKCA [plasma membrane]
(R-HSA-4332340)
PRKCA [plasma membrane]
(R-HSA-156469)
PRKCA [photoreceptor disc membrane]
(R-HSA-2648987)
PRKCA [nucleoplasm]
(R-HSA-450530)
0.556
3
UniProt:Q92993 KAT5
1
KAT5 [nucleoplasm]
(R-HSA-3321979)
0.556
3
UniProt:Q15047-2 SETDB1
0.556
3
UniProt:Q8TAP4-4 LMO3
0.556
3
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