Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
3x4Hyp-COL4A6 [endoplasmic reticulum lumen]
Stable Identifier
R-HSA-2022125
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
endoplasmic reticulum lumen
Synonyms
4-hydroxyprolyl collagen alpha-6(IV) propeptide, COL4A6, CO4A6_HUMAN
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Homo sapiens)
Collagen formation (Homo sapiens)
Collagen biosynthesis and modifying enzymes (Homo sapiens)
Collagen chain trimerization (Homo sapiens)
Association of procollagen type IV (Homo sapiens)
Alpha-6(IV) chains [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
C-linked procollagen type IV trimers [endoplasmic reticulum lumen] (Homo sapiens)
C-linked procollagen alpha-5(IV)X2 alpha-6(IV) trimer [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(IV) chains [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
Collagen prolyl 3-hydroxylase converts 4-Hyp collagen to 3,4-Hyp collagen (Homo sapiens)
Prolyl 3-hydroxylases:Fe2+:4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
P3HB binds 4-Hyp-collagen propeptides (Homo sapiens)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
Prolyl 3-hydroxylases:Fe2+:4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
P4HB:4-Hyp collagen propeptides dissociates (Homo sapiens)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
4-Hyp collagen propeptides:P4HB [endoplasmic reticulum lumen] (Homo sapiens)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
Procollagen lysyl hydroxylases convert collagen lysines to 5-hydroxylysines (Homo sapiens)
Lysyl hydroxylases:Lysyl hydroxylase procollagen substrates [endoplasmic reticulum membrane] (Homo sapiens)
Lysyl hydroxylase procollagen substrates [endoplasmic reticulum lumen] (Homo sapiens)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
Procollagen triple helix formation (Homo sapiens)
Collagen and procollagen triple helices:Serpin H1 [endoplasmic reticulum lumen] (Homo sapiens)
Collagen and procollagen triple helices [endoplasmic reticulum lumen] (Homo sapiens)
Non-fibrillar collagens [endoplasmic reticulum lumen] (Homo sapiens)
Tropocollagen type IV [endoplasmic reticulum lumen] (Homo sapiens)
Tropocollagen alpha-5(IV)X2 alpha-6(IV) [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(IV) chains [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
Procollagen C-linked trimers [endoplasmic reticulum lumen] (Homo sapiens)
C-linked procollagen type IV trimers [endoplasmic reticulum lumen] (Homo sapiens)
C-linked procollagen alpha-5(IV)X2 alpha-6(IV) trimer [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(IV) chains [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
Prolyl 4-hydroxylase converts collagen prolines to 4-hydroxyprolines (Homo sapiens)
4-Hyp collagen propeptides:P4HB [endoplasmic reticulum lumen] (Homo sapiens)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
Secretion of collagens (Homo sapiens)
Collagens and tropocollagens:Serpin H1 [endoplasmic reticulum lumen] (Homo sapiens)
Collagens and tropocollagens [endoplasmic reticulum lumen] (Homo sapiens)
Non-fibrillar collagens [endoplasmic reticulum lumen] (Homo sapiens)
Tropocollagen type IV [endoplasmic reticulum lumen] (Homo sapiens)
Tropocollagen alpha-5(IV)X2 alpha-6(IV) [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(IV) chains [endoplasmic reticulum lumen] (Homo sapiens)
3x4Hyp-COL4A6 [endoplasmic reticulum lumen] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q14031 COL4A6
Gene Names
COL4A6
Chain
signal peptide:1-22, chain:23-1691
Reference Genes
BioGPS Gene:1288 COL4A6
COSMIC (genes):COL4A6 COL4A6
CTD Gene:1288 COL4A6
dbSNP Gene:1288 COL4A6
ENSEMBL:ENSG00000197565 COL4A6
HGNC:2208 COL4A6
KEGG:hsa:1288 COL4A6
Monarch:1288 COL4A6
NCBI Gene:1288 COL4A6
OMIM:303631 COL4A6
UCSC:Q14031 COL4A6
Reference Transcript
RefSeq:NM_001287760.1 COL4A6
RefSeq:NM_001847.3 COL4A6
RefSeq:NM_033641.3 COL4A6
Other Identifiers
11725910_a_at
11741797_a_at
11750015_a_at
11751887_a_at
11751888_x_at
11751893_a_at
11759994_a_at
1288
17113195
210945_PM_at
210945_at
211473_PM_s_at
211473_s_at
213992_PM_at
213992_at
39939_at
4017539
4017540
4017541
4017542
4017543
4017544
4017545
4017547
4017548
4017549
4017550
4017551
4017552
4017553
4017556
4017557
4017558
4017560
4017561
4017563
4017564
4017565
4017567
4017568
4017569
4017570
4017571
4017577
4017578
4017579
4017580
4017581
4017582
4017583
4017584
4017586
4017589
4017591
4017592
4017593
4017594
4017595
4017596
4017597
4017598
4017599
4017601
4017603
4017605
4017607
4017608
4017609
4017611
4017613
4017614
4017615
4017617
4017620
4017622
4017623
4017624
4017625
4017626
4017632
4017633
4017634
4017648
4017649
4017650
4017651
4017652
4017653
4017661
4017677
4017678
4017679
52650_at
779_at
8174389
A_23_P217379
A_24_P915591
A_33_P3262969
D21337_at
GE753864
GE83658
GE88012
GO:0005198
GO:0005201
GO:0005515
GO:0005576
GO:0005581
GO:0005587
GO:0005604
GO:0005615
GO:0005788
GO:0007155
GO:0016020
GO:0030020
GO:0030198
GO:0030312
GO:0031012
GO:0038063
GO:0062023
GO:0071230
HMNXSV003026386
HMNXSV003029591
HMNXSV003040585
Hs.408.2.S1_3p_at
ILMN_1675857
ILMN_1811289
ILMN_1813021
PH_hs_0000049
TC0X001267.hg
g13529040_3p_at
g496977_3p_a_at
Participates
as a member of
Alpha-6(IV) chains [endoplasmic reticulum lumen] (Homo sapiens)
as a candidate of
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Other forms of this molecule
3x4Hyp-GlcGalHyl-COL4A6 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GlcGalHyl-COL4A6 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GalHyl-COL4A6 [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL4A6 [endoplasmic reticulum lumen]
GlcGalHyl-COL4A6 [endoplasmic reticulum lumen]
GalHyl-COL4A6 [endoplasmic reticulum lumen]
COL4A6 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL4A6 [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL4A6 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL4A6 [endoplasmic reticulum lumen]
5Hyl-COL4A6 [endoplasmic reticulum lumen]
5-sulfiliminyl collagen alpha-6(IV) chain [extracellular region]
3x4Hyp-3Hyp-COL4A6 [extracellular region]
5Hyl-COL4A6 [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL4A6 [extracellular region]
3x4Hyp-COL4A6 [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL4A6 [extracellular region]
3x4Hyp-GalHyl-COL4A6 [extracellular region]
GalHyl-COL4A6 [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL4A6 [extracellular region]
3x4Hyp-GlcGalHyl-COL4A6 [extracellular region]
3x4Hyp-5Hyl-COL4A6 [extracellular region]
COL4A6 [extracellular region]
GlcGalHyl-COL4A6 [extracellular region]
3x4Hyp-COL4A6(23-?) [extracellular region]
3x4Hyp-3Hyp-COL4A6(23-?) [extracellular region]
3x4Hyp-5Hyl-COL4A6(?-1691) [extracellular region]
COL4A6(23-?) [extracellular region]
3x4Hyp-GlcGalHyl-COL4A6(?-1691) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL4A6(?-1691) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL4A6(23-?) [extracellular region]
GalHyl-COL4A6(23-?) [extracellular region]
3x4Hyp-GalHyl-COL4A6(23-?) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL4A6(23-?) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL4A6(?-1691) [extracellular region]
3x4Hyp-3Hyp-COL4A6(?-1691) [extracellular region]
GlcGalHyl-COL4A6(?-1691) [extracellular region]
5Hyl-COL4A6(?-1691) [extracellular region]
GalHyl-COL4A6(?-1691) [extracellular region]
5Hyl-COL4A6(23-?) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL4A6(?-1691) [extracellular region]
COL4A6(?-1691) [extracellular region]
3x4Hyp-GlcGalHyl-COL4A6(23-?) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL4A6(23-?) [extracellular region]
3x4Hyp-5Hyl-COL4A6(23-?) [extracellular region]
3x4Hyp-GalHyl-COL4A6(?-1691) [extracellular region]
3x4Hyp-COL4A6(?-1691) [extracellular region]
GlcGalHyl-COL4A6(23-?) [extracellular region]
3,4-Hyp 5-sulfiliminyl collagen alpha-6(IV) chain [extracellular region]
4-Hyp 5-sulfiliminyl collagen alpha-6(IV) chain [extracellular region]
Inferred To
Col4a6 [endoplasmic reticulum lumen]
(Mus musculus)
Col4a6 [endoplasmic reticulum lumen]
(Rattus norvegicus)
COL4A6 [endoplasmic reticulum lumen]
(Bos taurus)
COL4A6 [endoplasmic reticulum lumen]
(Canis familiaris)
COL4A6 [endoplasmic reticulum lumen]
(Sus scrofa)
col4a6 [endoplasmic reticulum lumen]
(Xenopus tropicalis)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Cross References
RefSeq
NP_001838.2
,
NP_378667.1
,
NP_001274689.1
OpenTargets
ENSG00000197565
ENSEMBL
ENSP00000334733
,
ENST00000334504
,
ENSP00000361290
,
ENST00000372216
HPA
ENSG00000197565-COL4A6
PRO
Q14031
Pharos - Targets
Q14031
GlyGen
Q14031
Orphanet
COL4A6
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P05067 APP
20
APP(672-713) [extracellular region]
(R-HSA-879340)
APP(672-711) [cytosol]
(R-HSA-877188)
APP(672-711) [extracellular region]
(R-HSA-976740)
APP [endoplasmic reticulum lumen]
(R-HSA-8956696)
p-APP [endoplasmic reticulum lumen]
(R-HSA-8957012)
APP(18-770) [endosome lumen]
(R-HSA-5229077)
APP(672-711) [endosome lumen]
(R-HSA-6783333)
APP(672-713) [endosome lumen]
(R-HSA-5692993)
APP(672-770) [endosome lumen]
(R-HSA-9010082)
APP(712-770) [endosome lumen]
(R-HSA-6783331)
APP(714-770) [endosome lumen]
(R-HSA-6783325)
APP(18-671) [endosome lumen]
(R-HSA-5693003)
APP(18-770) [plasma membrane]
(R-HSA-9010038)
APP(18-770) [Golgi lumen]
(R-HSA-8871509)
APP(688-770) [plasma membrane]
(R-HSA-9010028)
APP(18-687) [extracellular region]
(R-HSA-9010033)
APP(18-770) [platelet alpha granule lumen]
(R-HSA-139835)
APP(18-770) [extracellular region]
(R-HSA-49335)
APP-C99 [cytosol]
(R-HSA-9617603)
APP(18-770) [trans-Golgi network membrane]
(R-HSA-5229136)
0.556
3
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text