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Go!
Schema
>
EntityWithAccessionedSequence
>
Entries
Pabpn1 [nucleoplasm]
Show undefined attributes
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compartment
[Compartment:7660] nucleoplasm
componentOf
[Complex:R-RNO-9933582] CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] - Rattus norvegicus
[Complex:R-RNO-9970402] Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] - Rattus norvegicus
[Complex:R-RNO-112164] upstream mRNA fragment:CPSF:PAP:PABPN1 complex [nucleoplasm] - Rattus norvegicus
[Complex:R-RNO-112162] intronless pre-mRNA cleavage complex [nucleoplasm] - Rattus norvegicus
consumedByEvent
[BlackBoxEvent:R-RNO-9970189] PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS - Rattus norvegicus
[BlackBoxEvent:R-RNO-9970320] PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS - Rattus norvegicus
[BlackBoxEvent:R-RNO-9970318] PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS - Rattus norvegicus
[Reaction:R-RNO-77591] Binding of Cleavage factors and Poly(A)Polymerase to the CstF:CPSF:Pre-mRNA Complex - Rattus norvegicus
created
[InstanceEdit:10102717] Weiser, Joel, 2026-03-16
dbId
10110526
displayName
Pabpn1 [nucleoplasm]
endCoordinate
306
inDisease
false
inferredFrom
[EntityWithAccessionedSequence:R-HSA-72008] PABPN1 [nucleoplasm] - Homo sapiens
maxDepth
1
name
Pabpn1
PABPN1
G3V7Z8
producedByEvent
[BlackBoxEvent:R-RNO-9970428] CPA complex components dissociate from polyadenylated pre-mRNA (distal 3'UTR PAS) - Rattus norvegicus
[BlackBoxEvent:R-RNO-9970431] CPA complex components dissociate from polyadenylated pre-mRNA (proximal 3'UTR PAS) - Rattus norvegicus
[BlackBoxEvent:R-RNO-9970429] CPA complex components dissociate from polyadenylated pre-mRNA (intronic PAS) - Rattus norvegicus
[Reaction:R-RNO-77593] Cleavage and polyadenylation of Intronless Pre-mRNA - Rattus norvegicus
referenceEntity
[ReferenceGeneProduct:uniprot:G3V7Z8] UniProt:G3V7Z8
referenceType
ReferenceGeneProduct
schemaClass
EntityWithAccessionedSequence
species
[Species:48895] Rattus norvegicus
stId
R-RNO-72008
startCoordinate
2
Referrals
(hasComponent)
[Complex:R-RNO-9933582] CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm]
[Complex:R-RNO-9935798] CBCA:ZFC3H1:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm]
[Complex:R-RNO-9970402] Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm]
[Complex:R-RNO-9970389] Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm]
[Complex:R-RNO-9970319] Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm]
[Complex:R-RNO-112164] upstream mRNA fragment:CPSF:PAP:PABPN1 complex [nucleoplasm]
[Complex:R-RNO-112162] intronless pre-mRNA cleavage complex [nucleoplasm]
[Complex:R-RNO-72021] Cleavage and Polyadenylation Complex [nucleoplasm]
(output)
[BlackBoxEvent:R-RNO-9970428] CPA complex components dissociate from polyadenylated pre-mRNA (distal 3'UTR PAS)
[BlackBoxEvent:R-RNO-9970431] CPA complex components dissociate from polyadenylated pre-mRNA (proximal 3'UTR PAS)
[BlackBoxEvent:R-RNO-9970429] CPA complex components dissociate from polyadenylated pre-mRNA (intronic PAS)
[Reaction:R-RNO-77593] Cleavage and polyadenylation of Intronless Pre-mRNA
(input)
[BlackBoxEvent:R-RNO-9970189] PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS
[BlackBoxEvent:R-RNO-9970320] PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS
[BlackBoxEvent:R-RNO-9970318] PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS
[Reaction:R-RNO-77591] Binding of Cleavage factors and Poly(A)Polymerase to the CstF:CPSF:Pre-mRNA Complex
(inferredTo)
[EntityWithAccessionedSequence:R-HSA-72008] PABPN1 [nucleoplasm]
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