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Pabpn1 [nucleoplasm]
Stable Identifier
R-RNO-72008
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
PABPN1, G3V7Z8
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Rattus norvegicus)
RNA Polymerase II Transcription (Rattus norvegicus)
RNA Polymerase II Transcription Termination (Rattus norvegicus)
Cleavage of Intronless Pre-mRNA at 3'-end (Rattus norvegicus)
intronless pre-mRNA cleavage complex [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
upstream mRNA fragment:CPSF:PAP:PABPN1 complex [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Metabolism of RNA (Rattus norvegicus)
Nuclear RNA decay (Rattus norvegicus)
MTREX (MTR4, SKIV2L2) in PAXT:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 binds the RNA exosome (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PAPBN1:RNA exosome [nucleoplasm] (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
RNA exosome in PAXT:PAPOLG:TENT4A,B:ZC3H3:CBCA:polyadenylated m7GpppN-RNA:PABPN1 hydrolyzes RNA (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PAPBN1:RNA exosome [nucleoplasm] (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
The PAXT connection (ZFC3H1:MTREX, ZFC3H1:MTR4), RBM26, RBM27, PAPOLG, YTHDC1, and YTHDC2 bind CBCA:polyadenylated m7GpppN-RNA:PABPN1 (Rattus norvegicus)
CBCA:ZFC3H1:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
mRNA 3'-end processing (Rattus norvegicus)
mRNA Polyadenylation (Rattus norvegicus)
CPA complex components dissociate from polyadenylated pre-mRNA (distal 3'UTR PAS) (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
CPA complex components dissociate from polyadenylated pre-mRNA (intronic PAS) (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
CPA complex components dissociate from polyadenylated pre-mRNA (proximal 3'UTR PAS) (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Processing of Capped Intronless Pre-mRNA (Rattus norvegicus)
Processing of Intronless Pre-mRNAs (Rattus norvegicus)
Binding of Cleavage factors and Poly(A)Polymerase to the CstF:CPSF:Pre-mRNA Complex (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
intronless pre-mRNA cleavage complex [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Cleavage and polyadenylation of Intronless Pre-mRNA (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
intronless pre-mRNA cleavage complex [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
Cleavage of Intronless Pre-mRNA at 3'-end (Rattus norvegicus)
intronless pre-mRNA cleavage complex [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
upstream mRNA fragment:CPSF:PAP:PABPN1 complex [nucleoplasm] (Rattus norvegicus)
Pabpn1 [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:G3V7Z8
Gene Names
Pabpn1
Reference Genes
BioGPS Gene:116697 Pabpn1
ENSEMBL:ENSRNOG00000042195
KEGG:rno:116697 Pabpn1
Monarch:116697 Pabpn1
NCBI Gene:116697 Pabpn1
UCSC:G3V7Z8 Pabpn1
Reference Transcript
RefSeq:NM_001135008.1 Pabpn1
Other Identifiers
116697
1371958_at
1379481_at
1392480_at
17698682
5695018
5775304
5899536
5962845
5970722
6042890
6045247
6134502
6307031
6441290
6546449
6661231
A_44_P446713
A_44_P449799
GO:0003676
GO:0003723
GO:0005634
GO:0005654
GO:0006913
GO:0016607
GO:0016973
GO:0042405
GO:1990904
ILMN_1361731
PH_rn_0013374
rc_AA942947_at
rc_AI236788_at
Participates
as a component of
CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
CBCA:ZFC3H1:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
upstream mRNA fragment:CPSF:PAP:PABPN1 complex [nucleoplasm] (Rattus norvegicus)
intronless pre-mRNA cleavage complex [nucleoplasm] (Rattus norvegicus)
Cleavage and Polyadenylation Complex [nucleoplasm] (Rattus norvegicus)
as an output of
CPA complex components dissociate from polyadenylated pre-mRNA (distal 3'UTR PAS) (Rattus norvegicus)
CPA complex components dissociate from polyadenylated pre-mRNA (proximal 3'UTR PAS) (Rattus norvegicus)
CPA complex components dissociate from polyadenylated pre-mRNA (intronic PAS) (Rattus norvegicus)
Cleavage and polyadenylation of Intronless Pre-mRNA (Rattus norvegicus)
as an input of
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Rattus norvegicus)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Rattus norvegicus)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Rattus norvegicus)
Binding of Cleavage factors and Poly(A)Polymerase to the CstF:CPSF:Pre-mRNA Complex (Rattus norvegicus)
Inferred From
PABPN1 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001128480.1
ENSEMBL
ENSRNOG00000042195
,
ENSRNOP00000021096
,
ENSRNOT00000021096
RGD
619928
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