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SMG9 [cytosol]
Stable Identifier
R-HSA-927812
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
cytosol
Synonyms
Protein SMG9, SMG9_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Nonsense-Mediated Decay (NMD) (Homo sapiens)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Homo sapiens)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Homo sapiens)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Homo sapiens)
SMG1:SMG8:SMG9 Complex [cytosol] (Homo sapiens)
SMG9 [cytosol] (Homo sapiens)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Homo sapiens)
SMG1:SMG8:SMG9 Complex [cytosol] (Homo sapiens)
SMG9 [cytosol] (Homo sapiens)
UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Homo sapiens)
SMG1:SMG8:SMG9 Complex [cytosol] (Homo sapiens)
SMG9 [cytosol] (Homo sapiens)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Homo sapiens)
SMG1:SMG8:SMG9 Complex [cytosol] (Homo sapiens)
SMG9 [cytosol] (Homo sapiens)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Homo sapiens)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Homo sapiens)
SMG1:SMG8:SMG9 Complex [cytosol] (Homo sapiens)
SMG9 [cytosol] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9H0W8 SMG9
Gene Names
SMG9, C19orf61
Chain
initiator methionine:1, chain:2-520
Reference Genes
BioGPS Gene:56006 SMG9
COSMIC (genes):SMG9 SMG9
CTD Gene:56006 SMG9
dbSNP Gene:56006 SMG9
ENSEMBL:ENSG00000105771.14 SMG9
HGNC:25763 SMG9
KEGG Gene (Homo sapiens):56006 SMG9
Monarch:56006 SMG9
NCBI Gene:56006 SMG9
OMIM:613176 SMG9
UCSC:Q9H0W8 SMG9
Reference Transcript
RefSeq:NM_019108.3 SMG9
Other Identifiers
0000630114
11717649_a_at
11717650_at
16873071
221335_PM_x_at
221335_x_at
223188_PM_at
223188_at
233990_PM_at
233990_at
3864595
3864596
3864598
3864599
3864600
3864602
3864603
3864605
3864606
3864610
3864611
3864617
3864618
3864620
3864621
3864622
3864624
3864625
3864627
3864632
3864636
48017_at
56006
8037389
A_23_P56127
GE53993
GE843961
GO:0000184
GO:0001654
GO:0001701
GO:0005515
GO:0005622
GO:0005737
GO:0005829
GO:0007420
GO:0007507
GO:0016071
GO:0042802
GO:0048856
HMNXSV003035809
HMNXSV003053048
Hs.10116.2.S1_3p_at
ILMN_1737005
PH_hs_0001044
TC19001594.hg
g10092658_3p_a_at
g12052737_3p_at
Participates
as a component of
SMG1:SMG8:SMG9 Complex [cytosol] (Homo sapiens)
Inferred To
Ghost homologue of SMG9 [cytosol]
(Gallus gallus)
Ghost homologue of SMG9 [cytosol]
(Plasmodium falciparum)
Ghost homologue of SMG9 [cytosol]
(Saccharomyces cerevisiae)
Ghost homologue of SMG9 [cytosol]
(Schizosaccharomyces pombe)
Smg9 [cytosol]
(Mus musculus)
Smg9 [cytosol]
(Rattus norvegicus)
smg9 [cytosol]
(Xenopus tropicalis)
SMG9 [cytosol]
(Bos taurus)
SMG9 [cytosol]
(Canis familiaris)
SMG9 [cytosol]
(Danio rerio)
SMG9 [cytosol]
(Dictyostelium discoideum)
SMG9 [cytosol]
(Drosophila melanogaster)
SMG9 [cytosol]
(Sus scrofa)
smg-9 [cytosol]
(Caenorhabditis elegans)
Cross References
RefSeq
NP_061981.2
OpenTargets
ENSG00000105771
HPA
ENSG00000105771-SMG9
GeneCards
Q9H0W8
Ensembl
ENST00000270066
,
ENSP00000471398
,
ENST00000601170
,
ENSP00000270066
,
ENSG00000105771
PRO
Q9H0W8
Pharos - Targets
Q9H0W8
Orphanet
24930
PDB
6Z3R
,
7PW8
,
6L54
,
7PW5
,
6SYT
,
7PW7
,
7PW4
,
7PW9
Interactors (6)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q12933 TRAF2
5
TRAF2 [nucleoplasm]
(R-HSA-8862199)
K63polyUb-TRAF2 [nucleoplasm]
(R-HSA-8862194)
K63polyUb-TRAF2 [cytosol]
(R-HSA-8862193)
PolyUb-TRAF2 [cytosol]
(R-HSA-6782848)
TRAF2 [cytosol]
(R-HSA-66370)
0.718
6
UniProt:Q08379 GOLGA2
3
p-S37-GOLGA2 [Golgi membrane]
(R-HSA-2172179)
GOLGA2 [endoplasmic reticulum-Golgi intermediate compartment membrane]
(R-HSA-2167933)
GOLGA2 [Golgi membrane]
(R-HSA-6808764)
0.556
3
UniProt:P14373 TRIM27
2
TRIM27 [nucleoplasm]
(R-HSA-2997690)
TRIM27 [cytosol]
(R-HSA-8851002)
0.556
3
UniProt:P53365 ARFIP2
1
ARFIP2 [cytosol]
(R-HSA-6813848)
0.556
3
UniProt:Q6ZPD8 DGAT2L6
1
DGAT2L6 [endoplasmic reticulum membrane]
(R-HSA-8848588)
0.556
3
UniProt:Q9BRV3 SLC50A1
1
SLC50A1 [plasma membrane]
(R-HSA-5216211)
0.556
3
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