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TRA2B [nucleoplasm]
Stable Identifier
R-HSA-8850859
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Transformer-2 protein homolog beta, TRA2B_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Cleavage at the 3'-Splice Site and Exon Ligation (Homo sapiens)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Homo sapiens)
TRA2B [nucleoplasm] (Homo sapiens)
Formation of Exon Junction Complex (Homo sapiens)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Homo sapiens)
TRA2B [nucleoplasm] (Homo sapiens)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Homo sapiens)
TRA2B [nucleoplasm] (Homo sapiens)
Lariat Formation and 5'-Splice Site Cleavage (Homo sapiens)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Homo sapiens)
TRA2B [nucleoplasm] (Homo sapiens)
TRA2B [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:P62995 TRA2B
Gene Names
TRA2B, SFRS10
Chain
initiator methionine:1, chain:2-288
Reference Genes
BioGPS Gene:6434 TRA2B
COSMIC (genes):TRA2B TRA2B
CTD Gene:6434 TRA2B
dbSNP Gene:6434 TRA2B
ENSEMBL:ENSG00000136527 TRA2B
HGNC:10781 TRA2B
KEGG Gene (Homo sapiens):6434 TRA2B
Monarch:6434 TRA2B
NCBI Gene:6434 TRA2B
OMIM:602719 TRA2B
UCSC:P62995 TRA2B
Reference Transcript
RefSeq:XM_005247703.1 TRA2B
RefSeq:XM_017007033.1 TRA2B
RefSeq:NM_004593.2 TRA2B
RefSeq:XM_011513072.2 TRA2B
RefSeq:NM_001243879.1 TRA2B
Other Identifiers
0002470148
11734662_a_at
11734663_at
11746041_a_at
11746042_s_at
11746043_x_at
11753944_a_at
11753945_x_at
11753975_x_at
11756318_x_at
11757832_s_at
140_s_at
16962359
200892_PM_s_at
200892_s_at
200893_PM_at
200893_at
210180_3p_s_at
210180_PM_s_at
210180_s_at
239447_PM_at
239447_at
2709072
2709073
2709074
2709075
2709076
2709077
2709078
2709079
2709081
2709084
2709086
2709087
2709089
2709091
2709092
2709093
2709095
2709096
2709101
2709102
2709112
2709113
2709114
2709115
6434
70770_at
74923_at
8092564
A_23_P212639
A_24_P145911
A_33_P3297517
GE59355
GE710350
GO:0000375
GO:0000381
GO:0000398
GO:0003674
GO:0003676
GO:0003723
GO:0003729
GO:0005515
GO:0005575
GO:0005622
GO:0005634
GO:0005635
GO:0005637
GO:0005654
GO:0005681
GO:0006397
GO:0008150
GO:0008380
GO:0009790
GO:0019904
GO:0021796
GO:0032991
GO:0034641
GO:0036002
GO:0042592
GO:0042802
GO:0043226
GO:0043484
GO:0048026
GO:0048856
GO:0071333
GO:1990403
HMNXSV003008467
HMNXSV003014480
HMNXSV003020689
Hs.133257.0.A1_3p_at
ILMN_1742798
PH_hs_0039988
TC03002080.hg
U68063_at
g12653362_3p_s_at
g2367403_3p_at
g2367403_3p_s_at
g4759097_3p_at
Participates
as an input of
Lariat Formation and 5'-Splice Site Cleavage (Homo sapiens)
as a component of
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Homo sapiens)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Homo sapiens)
Other forms of this molecule
TRA2B [cytosol]
Inferred To
tra2 [nucleoplasm]
(Drosophila melanogaster)
Tra2b [nucleoplasm]
(Mus musculus)
Tra2b [nucleoplasm]
(Rattus norvegicus)
TRA2B [nucleoplasm]
(Bos taurus)
TRA2B [nucleoplasm]
(Canis familiaris)
TRA2B [nucleoplasm]
(Gallus gallus)
TRA2B [nucleoplasm]
(Sus scrofa)
rsp-8 [nucleoplasm]
(Caenorhabditis elegans)
tra2b [nucleoplasm]
(Danio rerio)
tra2b [nucleoplasm]
(Xenopus tropicalis)
Cross References
RefSeq
XP_011511374.1
,
XP_016862522.1
,
XP_005247760.1
,
NP_004584.1
,
NP_001230808.1
OpenTargets
ENSG00000136527
HPA
ENSG00000136527-TRA2B
GeneCards
P62995
Ensembl
ENST00000456380
,
ENSP00000416959
,
ENSG00000136527
,
ENSP00000416887
,
ENST00000453386
,
ENSP00000371626
,
ENST00000382191
PRO
P62995
Pharos - Targets
P62995
PDB
2RRA
,
2CQC
,
2KXN
,
2RRB
Interactors (18)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P78362 SRPK2
1
SRPK2 [cytosol]
(R-HSA-9729332)
0.756
5
UniProt:P49761 CLK3
0.742
8
UniProt:Q08170 SRSF4
1
SRSF4 [nucleoplasm]
(R-HSA-72024)
0.666
4
UniProt:Q96MU7 YTDC1
0.666
4
UniProt:P38159 RBMX
2
RBMX [nucleoplasm]
(R-HSA-71939)
RBMX [cytosol]
(R-HSA-9715135)
0.666
4
UniProt:P63104 YWHAZ
2
YWHAZ [nucleoplasm]
(R-HSA-450469)
YWHAZ [cytosol]
(R-HSA-206099)
0.589
2
UniProt:P61981 YWHAG
1
YWHAG [cytosol]
(R-HSA-380312)
0.589
2
UniProt:P62995 TRA2B
2
TRA2B [nucleoplasm]
(R-HSA-8850859)
TRA2B [cytosol]
(R-HSA-9715137)
0.556
3
UniProt:Q9Y5E9 PCDBE
0.556
3
UniProt:Q7L775 EPMIP
0.556
3
UniProt:Q07955 SRSF1
1
SRSF1 [nucleoplasm]
(R-HSA-72031)
0.556
3
UniProt:Q86VE0 MYPOP
0.556
3
UniProt:Q01081 U2AF1
1
U2AF1 [nucleoplasm]
(R-HSA-71985)
0.556
3
UniProt:P49759-3 CLK1
0.556
5
UniProt:Q9BRL6-2 SRSF8
0.556
3
UniProt:Q96A72 MAGOHB
1
MAGOHB [nucleoplasm]
(R-HSA-8867888)
0.556
3
UniProt:Q15415 RBY1F
0.556
3
UniProt:Q13242 SRSF9
1
SRSF9 [nucleoplasm]
(R-HSA-72037)
0.556
3
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