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Schema
>
BlackBoxEvent
>
Entries
Expression of T (Tbxt) in the primitive streak
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authored
[InstanceEdit:9754188] May, Bruce, 2021-09-22
category
omitted
compartment
[Compartment:7660] nucleoplasm
created
[InstanceEdit:9754277] May, Bruce, 2021-09-23
dbId
9754300
displayName
Expression of T (Tbxt) in the primitive streak
edited
[InstanceEdit:9754188] May, Bruce, 2021-09-22
input
[EntityWithAccessionedSequence:R-MMU-9754278] Tbxt gene [nucleoplasm]
isChimeric
false
isInDisease
false
isInferred
false
literatureReference
[LiteratureReference:9754257] Brachyury is a target gene of the Wnt/beta-catenin signaling pathway
[LiteratureReference:9754249] T (Brachyury) is a direct target of Wnt3a during paraxial mesoderm specification
[LiteratureReference:9757306] Beta-catenin regulates Cripto- and Wnt3-dependent gene expression programs in mouse axis and mesoderm formation
[LiteratureReference:9757596] Making a commitment: cell lineage allocation and axis patterning in the early mouse embryo
[LiteratureReference:9761134] Expression pattern of the Brachyury gene in whole-mount TWis/TWis mutant embryos
[LiteratureReference:9761136] Immunohistochemical analysis of the Brachyury protein in wild-type and mutant mouse embryos
[LiteratureReference:9794959] Pluripotency factors in embryonic stem cells regulate differentiation into germ layers
[LiteratureReference:9794956] Charting Brachyury-mediated developmental pathways during early mouse embryogenesis
[LiteratureReference:9754504] Eomes and Brachyury control pluripotency exit and germ-layer segregation by changing the chromatin state
maxDepth
1
modified
[InstanceEdit:9830342] Matthews, Lisa, 2023-03-08
name
Expression of T (Tbxt) in the primitive streak
orthologousEvent
[BlackBoxEvent:R-HSA-452331] Expression of TBXT (T, Brachyury) in the primitive streak - Homo sapiens
output
[EntityWithAccessionedSequence:R-MMU-9733724] Tbxt [nucleoplasm]
regulatedBy
[PositiveGeneExpressionRegulation:9754292] Positive gene expression regulation by 'Lef1,Tcf7:Ctnnb1:Tp63:Tbpl2:T gene [nucleoplasm]'
[PositiveGeneExpressionRegulation:9754264] Positive gene expression regulation by 'Bmp4 dimer [extracellular region]'
regulationReference
[RegulationReference:9754243] Positive gene expression regulation by 'Bmp4 [extracellular region]' Bmp signaling maintains a mesoderm progenitor cell state in the mouse tailbud
[RegulationReference:9754290] Positive gene expression regulation by 'Lef1,Tcf7:Ctnnb1:Tp63:Tbpl2:T gene [nucleoplasm]' Lack of beta-catenin affects mouse development at gastrulation
releaseDate
2022-06-09
reviewStatus
[ReviewStatus:9821382] five stars
reviewed
[InstanceEdit:9773645] Tam, Patrick P L, 2022-05-08
[InstanceEdit:9796182] Salehin, Nazmus, 2022-05-08
[InstanceEdit:9794593] Probst, Simone, 2022-07-18
[InstanceEdit:9796183] Zissel, Lea, 2022-07-18
schemaClass
BlackBoxEvent
species
[Species:48892] Mus musculus
stId
R-MMU-9754300
summation
[Summation:9754513] The Tbxt (T, Brachyury) gene is transcribed to yield mRNA an...
updateTrackers
[UpdateTracker:9846955] Update Tracker - [BlackBoxEvent:9754300] Expression of T (Tbxt) in the primitive streak - v82:[add_removeLiteratureReference, modifyText]
Referrals
(updatedInstance)
[UpdateTracker:9846955] Update Tracker - [BlackBoxEvent:9754300] Expression of T (Tbxt) in the primitive streak - v82:[add_removeLiteratureReference, modifyText]
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