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Schema
>
BlackBoxEvent
>
Entries
Addition of the third nucleotide on the nascent HIV-1 transcript
Show undefined attributes
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authored
[InstanceEdit:165064] Matthews, L, Rice, AP, 2005-07-27 00:00:00
catalystActivity
[CatalystActivity:109910] DNA-directed RNA polymerase activity of RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm]
category
omitted
compartment
[Compartment:7660] nucleoplasm
created
[InstanceEdit:167126] Matthews, L, 2005-10-11 08:30:05
crossReference
[DatabaseIdentifier:12020765] Mondo:0005109
dbId
167121
disease
[Disease:1660559] Human immunodeficiency virus infectious disease
displayName
Addition of the third nucleotide on the nascent HIV-1 transcript
edited
[InstanceEdit:165066] Matthews, L, 2005-07-26 23:29:22
eventOf
[Pathway:R-HSA-167162] RNA Polymerase II HIV Promoter Escape - Homo sapiens
followingEvent
[Reaction:R-HSA-167474] Abortive HIV-1 Initiation Before Second Transition - Homo sapiens
[BlackBoxEvent:R-HSA-9613490] Unwinding of DNA for the nascent HIV-1 transcript: Second Transition - Homo sapiens
inferredFrom
[BlackBoxEvent:R-HSA-75850] Addition of the third nucleotide on the nascent transcript - Homo sapiens
input
[Complex:R-HSA-167101] HIV-1 transcription complex [nucleoplasm]
[SimpleEntity:R-ALL-9757634] NTP [nucleoplasm]
isInDisease
true
isInferred
true
literatureReference
[LiteratureReference:110387] Three transitions in the RNA polymerase II transcription complex during initiation.
[LiteratureReference:111262] Translocation after synthesis of a four-nucleotide RNA commits RNA polymerase II to promoter escape.
maxDepth
1
modified
[InstanceEdit:9830342] Matthews, Lisa, 2023-03-08
name
Addition of the third nucleotide on the nascent HIV-1 transcript
output
[Complex:R-HSA-167119] HIV-1 transcription complex containing 3 nucleotide long transcript [nucleoplasm]
[SimpleEntity:R-ALL-113541] PPi [nucleoplasm]
precedingEvent
[BlackBoxEvent:R-HSA-9613498] Unwinding of DNA for the nascent HIV-1 transcript - Homo sapiens
relatedSpecies
[Species:164493] Human immunodeficiency virus 1
releaseDate
2005-06-13
reviewStatus
[ReviewStatus:9821382] five stars
schemaClass
BlackBoxEvent
species
[Species:48887] Homo sapiens
stId
R-HSA-167121
summation
[Summation:111263] Formation of the second phosphodiester bond creates a 3-nt p...
updateTrackers
[UpdateTracker:9775452] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v79:[add_removeInput]
[UpdateTracker:9784517] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v54:[addLiteratureReference]
[UpdateTracker:9789802] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v37:[modifyText]
[UpdateTracker:9783044] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v57:[modifyText]
[UpdateTracker:9782485] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v59:[modifyText]
[UpdateTracker:9779215] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v66:[removeCatalystActivity]
[UpdateTracker:9784596] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v53:[modifyText]
Referrals
(updatedInstance)
[UpdateTracker:9775452] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v79:[add_removeInput]
[UpdateTracker:9784517] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v54:[addLiteratureReference]
[UpdateTracker:9789802] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v37:[modifyText]
[UpdateTracker:9783044] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v57:[modifyText]
[UpdateTracker:9782485] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v59:[modifyText]
[UpdateTracker:9779215] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v66:[removeCatalystActivity]
[UpdateTracker:9784596] Update Tracker - [BlackBoxEvent:167121] Addition of the third nucleotide on the nascent HIV-1 transcript - v53:[modifyText]
(hasEvent)
[Pathway:R-HSA-167162] RNA Polymerase II HIV Promoter Escape
(precedingEvent)
[Reaction:R-HSA-167474] Abortive HIV-1 Initiation Before Second Transition
[BlackBoxEvent:R-HSA-9613490] Unwinding of DNA for the nascent HIV-1 transcript: Second Transition
(inferredTo)
[BlackBoxEvent:R-HSA-75850] Addition of the third nucleotide on the nascent transcript
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