Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
sdc1 [plasma membrane]
Stable Identifier
R-XTR-2076626
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
plasma membrane
Synonyms
HS(5)-SDC1, A0A803JF35
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Heparan sulfate/heparin (HS-GAG) metabolism (Xenopus tropicalis)
HS-GAG biosynthesis (Xenopus tropicalis)
Some HSPGs are secreted to the plasma membrane (Xenopus tropicalis)
HSPGs [plasma membrane] (Xenopus tropicalis)
HS(5)-PGs [plasma membrane] (Xenopus tropicalis)
sdc1 [plasma membrane] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:A0A803JF35
Gene Names
sdc1
Reference Genes
ENSEMBL:ENSXETG00000049205
KEGG Gene (Xenopus tropicalis):100038138 sdc1
Reference Transcript
RefSeq:XM_031902967.1 sdc1
Other Identifiers
100038138
GO:0016020
Participates
as a member of
HS(5)-PGs [plasma membrane] (Xenopus tropicalis)
Other forms of this molecule
sdc1 [plasma membrane]
sdc1 [lysosomal lumen]
sdc1 [plasma membrane]
sdc1 [plasma membrane]
sdc1 [plasma membrane]
sdc1 [plasma membrane]
sdc1 [plasma membrane]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [Golgi lumen]
sdc1 [lysosomal lumen]
Inferred From
HS(5)-SDC1 [plasma membrane]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63661) at unknown position
Modification
beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
XP_031758827.1
Xenbase
XB-GENE-494960
Ensembl
ENSXETG00000049205
,
ENSXETP00000106528
,
ENSXETT00000113617
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text