Reactome | sdc1 [Golgi lumen]

sdc1 [Golgi lumen]

Stable Identifier

R-XTR-2076558

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

Golgi lumen

Synonyms

Heparan(2)-SDC1, A0A803JF35

External Reference Information

External Reference

UniProt:A0A803JF35

Gene Names

sdc1

Reference Genes

ENSEMBL:ENSXETG00000049205

KEGG Gene (Xenopus tropicalis):100038138 sdc1

Reference Transcript

RefSeq:XM_031902967.1 sdc1

Other Identifiers

100038138

GO:0016020

Participates

as a member of

Heparan(2)-PGs [Golgi lumen] (Xenopus tropicalis)

Other forms of this molecule

sdc1 [plasma membrane]

sdc1 [lysosomal lumen]

sdc1 [plasma membrane]

sdc1 [Golgi lumen]

sdc1 [lysosomal lumen]

Inferred From

Heparan(2)-SDC1 [Golgi lumen] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63648) at unknown position

Modification

alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

XP_031758827.1

Xenbase

XB-GENE-494960

Ensembl

ENSXETG00000049205, ENSXETP00000106528, ENSXETT00000113617

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