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gpc1 [Golgi lumen]
Stable Identifier
R-XTR-2064076
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
Gal-Xyl-GPC1, Q0V9W0
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Chondroitin sulfate/dermatan sulfate metabolism (Xenopus tropicalis)
A tetrasaccharide linker sequence is required for GAG synthesis (Xenopus tropicalis)
B3GALT6 transfers Gal to the tetrasaccharide linker (Xenopus tropicalis)
Gal-Xyl-proteins [Golgi lumen] (Xenopus tropicalis)
gpc1 [Golgi lumen] (Xenopus tropicalis)
B4GALT7 transfers Gal group to xylosyl-unit of the tetrasaccharide linker (Xenopus tropicalis)
Gal-Xyl-proteins [Golgi lumen] (Xenopus tropicalis)
gpc1 [Golgi lumen] (Xenopus tropicalis)
Heparan sulfate/heparin (HS-GAG) metabolism (Xenopus tropicalis)
A tetrasaccharide linker sequence is required for GAG synthesis (Xenopus tropicalis)
B3GALT6 transfers Gal to the tetrasaccharide linker (Xenopus tropicalis)
Gal-Xyl-proteins [Golgi lumen] (Xenopus tropicalis)
gpc1 [Golgi lumen] (Xenopus tropicalis)
B4GALT7 transfers Gal group to xylosyl-unit of the tetrasaccharide linker (Xenopus tropicalis)
Gal-Xyl-proteins [Golgi lumen] (Xenopus tropicalis)
gpc1 [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q0V9W0
Gene Names
gpc1
Reference Genes
BioGPS Gene:779769 gpc1
ENSEMBL:ENSXETG00000003037
KEGG Gene (Xenopus tropicalis):779769 gpc1
Monarch:779769 gpc1
NCBI Gene:779769 gpc1
Reference Transcript
RefSeq:NM_001078848.1 gpc1
Other Identifiers
779769
Participates
as a member of
Gal-Xyl-proteins [Golgi lumen] (Xenopus tropicalis)
Other forms of this molecule
gpc1 [lysosomal lumen]
gpc1 [lysosomal lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
Inferred From
Gal-Xyl-GPC1 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63502) at unknown position
Modification
beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001072316.1
Xenbase
XB-GENE-964661
Ensembl
ENSXETT00000104077
,
ENSXETG00000003037
,
ENSXETP00000088342
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