Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
gpc1 [plasma membrane]
Stable Identifier
R-XTR-2076648
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
plasma membrane
Synonyms
HS(5)-GPC1, Q0V9W0
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Heparan sulfate/heparin (HS-GAG) metabolism (Xenopus tropicalis)
HS-GAG biosynthesis (Xenopus tropicalis)
Some HSPGs are secreted to the plasma membrane (Xenopus tropicalis)
HSPGs [plasma membrane] (Xenopus tropicalis)
HS(5)-PGs [plasma membrane] (Xenopus tropicalis)
gpc1 [plasma membrane] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q0V9W0
Gene Names
gpc1
Reference Genes
BioGPS Gene:779769 gpc1
ENSEMBL:ENSXETG00000003037
KEGG Gene (Xenopus tropicalis):779769 gpc1
Monarch:779769 gpc1
NCBI Gene:779769 gpc1
Reference Transcript
RefSeq:NM_001078848.1 gpc1
Other Identifiers
779769
Participates
as a member of
HS(5)-PGs [plasma membrane] (Xenopus tropicalis)
Other forms of this molecule
gpc1 [lysosomal lumen]
gpc1 [lysosomal lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
Inferred From
HS(5)-GPC1 [plasma membrane]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group) at unknown position
Modification
beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001072316.1
Xenbase
XB-GENE-964661
Ensembl
ENSXETT00000104077
,
ENSXETG00000003037
,
ENSXETP00000088342
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text