Reactome | gpc1 [plasma membrane]

gpc1 [plasma membrane]

Stable Identifier

R-XTR-2076636

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

plasma membrane

Synonyms

HS(3)-GPC1, Q0V9W0

Locations in the PathwayBrowser

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Metabolism (Xenopus tropicalis)

- Metabolism of carbohydrates (Xenopus tropicalis)
  - Glycosaminoglycan metabolism (Xenopus tropicalis)
    - Heparan sulfate/heparin (HS-GAG) metabolism (Xenopus tropicalis)
      - HS-GAG biosynthesis (Xenopus tropicalis)
        
        Some HSPGs are secreted to the plasma membrane (Xenopus tropicalis)
        
        HSPGs [plasma membrane] (Xenopus tropicalis)
        
        HS(3)-PGs [plasma membrane] (Xenopus tropicalis)
        
        gpc1 [plasma membrane] (Xenopus tropicalis)

External Reference Information

External Reference

UniProt:Q0V9W0

Gene Names

gpc1

Reference Genes

BioGPS Gene:779769 gpc1

ENSEMBL:ENSXETG00000003037

KEGG Gene (Xenopus tropicalis):779769 gpc1

Monarch:779769 gpc1

NCBI Gene:779769 gpc1

Reference Transcript

RefSeq:NM_001078848.1 gpc1

Other Identifiers

779769

Participates

as a member of

HS(3)-PGs [plasma membrane] (Xenopus tropicalis)

Other forms of this molecule

gpc1 [lysosomal lumen]

gpc1 [Golgi lumen]

gpc1 [plasma membrane]

gpc1 [Golgi lumen]

Inferred From

HS(3)-GPC1 [plasma membrane] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63654) at unknown position

Modification

beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

NP_001072316.1

Xenbase

XB-GENE-964661

Ensembl

ENSXETT00000104077, ENSXETG00000003037, ENSXETP00000088342

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