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bgn [extracellular region]
Stable Identifier
R-XTR-2064017
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
extracellular region
Synonyms
C6S-BGN, Q0P4I3
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Chondroitin sulfate/dermatan sulfate metabolism (Xenopus tropicalis)
CS/DS degradation (Xenopus tropicalis)
DSPG and CSPG translocate to the lysosome for degradation (Xenopus tropicalis)
CSPGs [extracellular region] (Xenopus tropicalis)
C6S-PGs [extracellular region] (Xenopus tropicalis)
bgn [extracellular region] (Xenopus tropicalis)
Chondroitin sulfate biosynthesis (Xenopus tropicalis)
CSPG is secreted (Xenopus tropicalis)
CSPGs [extracellular region] (Xenopus tropicalis)
C6S-PGs [extracellular region] (Xenopus tropicalis)
bgn [extracellular region] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q0P4I3
Gene Names
bgn
Reference Genes
BioGPS Gene:780007 bgn
ENSEMBL:ENSXETG00000012934
KEGG:xtr:780007 bgn
Monarch:780007 bgn
NCBI Gene:780007 bgn
UCSC:Q0P4I3 bgn
Reference Transcript
RefSeq:NM_001079084.2 bgn
Other Identifiers
780007
GO:0005576
Participates
as a member of
C6S-PGs [extracellular region] (Xenopus tropicalis)
Other forms of this molecule
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [extracellular region]
bgn [extracellular region]
bgn [extracellular region]
bgn [Golgi lumen]
bgn [Golgi lumen]
bgn [extracellular region]
bgn [extracellular region]
bgn [lysosomal lumen]
bgn [lysosomal lumen]
bgn [lysosomal lumen]
bgn [lysosomal lumen]
bgn [lysosomal lumen]
bgn [lysosomal lumen]
bgn [lysosomal lumen]
Inferred From
C6S-BGN [extracellular region]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63512) at unknown position
Modification
beta-D-GalNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-GalNAc6S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
ENSEMBL
ENSXETT00000028317
,
ENSXETP00000028317
Xenbase
XB-GENE-1003139
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