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D2,4,4(S)3-BGN [lysosomal lumen]
Stable Identifier
R-XTR-2065133
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
lysosomal lumen
Synonyms
F6PPY3
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Chondroitin sulfate/dermatan sulfate metabolism (Xenopus tropicalis)
CS/DS degradation (Xenopus tropicalis)
DSPG and CSPG translocate to the lysosome for degradation (Xenopus tropicalis)
DSPGs [lysosomal lumen] (Xenopus tropicalis)
D2,4,4(S)3-PGs [lysosomal lumen] (Xenopus tropicalis)
D2,4,4(S)3-BGN [lysosomal lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:F6PPY3
Reference Genes
ENSEMBL:ENSXETG00000012934
Participant Of
hasMember
D2,4,4(S)3-PGs [lysosomal lumen]
Other forms of this molecule
dermatan-BGN [Golgi lumen]
D2,4(S)2-BGN [Golgi lumen]
D2,4,4(S)3-BGN [Golgi lumen]
D4S-BGN [Golgi lumen]
chondroitin(1)-BGN [Golgi lumen]
chondroitin(2)-BGN [Golgi lumen]
chondroitin(3)-BGN [Golgi lumen]
C4S-BGN [Golgi lumen]
CSE-BGN [Golgi lumen]
C6S-BGN [Golgi lumen]
CSE-BGN [lysosomal lumen]
C6S-BGN [lysosomal lumen]
C4S-BGN [lysosomal lumen]
D2,4(S)2-BGN [lysosomal lumen]
D4S-BGN [lysosomal lumen]
D4S-BGN [extracellular region]
D2,4(S)2-BGN [extracellular region]
D2,4,4(S)3-BGN [extracellular region]
CSE-BGN [extracellular region]
C6S-BGN [extracellular region]
C4S-BGN [extracellular region]
BGN [lysosomal lumen]
BGN [Golgi lumen]
XylS-BGN [Golgi lumen]
Gal-Xyl-BGN [Golgi lumen]
GlcA-Gal-Gal-Xyl-BGN [Golgi lumen]
Gal-Gal-Xyl-BGN [Golgi lumen]
Inferred From
D2,4,4(S)3-BGN [lysosomal lumen] (Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63519) at unknown position
Modification
beta-D-GalNAc4S-(1->4)-beta-D-IdoA2S-(1->3)-beta-D-GalNAc4S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
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