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Gpc4 [plasma membrane]
Stable Identifier
R-RNO-2076677
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
plasma membrane
Synonyms
HS(6)-GPC4, Q642B0
Locations in the PathwayBrowser
Expand all
Metabolism (Rattus norvegicus)
Metabolism of carbohydrates (Rattus norvegicus)
Glycosaminoglycan metabolism (Rattus norvegicus)
Heparan sulfate/heparin (HS-GAG) metabolism (Rattus norvegicus)
HS-GAG biosynthesis (Rattus norvegicus)
Some HSPGs are secreted to the plasma membrane (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
HS-GAG degradation (Rattus norvegicus)
HS-GAGs translocate to the lysosome for degradation (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
Heparanase 2 (HPSE2) binds heparan sulfate proteoglycans (Rattus norvegicus)
HPSE2:HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
Metabolism of vitamins and cofactors (Rattus norvegicus)
Metabolism of fat-soluble vitamins (Rattus norvegicus)
Retinoid metabolism and transport (Rattus norvegicus)
CR:atREs binds apoE and HSPG (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
LRPs transport extracellular CR:atREs:HSPG:apoE to cytosol (Rattus norvegicus)
CR:atREs:HSPG:apoE [early endosome] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
Sensory Perception (Rattus norvegicus)
Visual phototransduction (Rattus norvegicus)
Retinoid metabolism and transport (Rattus norvegicus)
CR:atREs binds apoE and HSPG (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
LRPs transport extracellular CR:atREs:HSPG:apoE to cytosol (Rattus norvegicus)
CR:atREs:HSPG:apoE [early endosome] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Gpc4 [plasma membrane] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:Q642B0
Gene Names
Gpc4
Reference Genes
BioGPS Gene:317322 Gpc4
ENSEMBL:ENSRNOG00000002413
ENSEMBL:ENSRNOG00000002413.7 Gpc4
KEGG Gene (Rattus norvegicus):317322 Gpc4
Monarch:317322 Gpc4
NCBI Gene:317322 Gpc4
Reference Transcript
RefSeq:NM_001014108.1 Gpc4
RefSeq:XM_006257580.3 Gpc4
Other Identifiers
10939744
1392888_at
17879304
317322
5701219
5706358
5710900
5742383
5836063
5978963
5986915
5996858
6000236
6025960
6160673
6393907
6691198
A_42_P547976
A_43_P21658
GE1242550
GE13839
GO:0005886
GO:0007155
GO:0009966
GO:0023052
GO:0030312
GO:0031012
GO:0034330
GO:0045202
GO:0062023
GO:0098978
GO:0099560
ILMN_1650537
PH_rn_0008535
rc_AI071251_at
Participates
as a member of
HS/HPIN-PGs [plasma membrane] (Rattus norvegicus)
Other forms of this molecule
Gpc4 [lysosomal lumen]
Gpc4 [lysosomal lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [plasma membrane]
Gpc4 [plasma membrane]
Gpc4 [plasma membrane]
Gpc4 [plasma membrane]
Gpc4 [plasma membrane]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Inferred From
HS(6)-GPC4 [plasma membrane]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63666) at unknown position
Modification
beta-D-IdoA-(1->4)-alpha-D-GlcNS6S-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
XP_006257642.1
,
NP_001014130.1
Ensembl
ENSRNOP00000003282
,
ENSRNOG00000002413
,
ENSRNOT00000003282
RGD
1359399
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