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Gpc4 [Golgi lumen]
Stable Identifier
R-RNO-2076440
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
Golgi lumen
Synonyms
Heparan(4)-GPC4, Q642B0
Locations in the PathwayBrowser
Expand all
Metabolism (Rattus norvegicus)
Metabolism of carbohydrates (Rattus norvegicus)
Glycosaminoglycan metabolism (Rattus norvegicus)
Heparan sulfate/heparin (HS-GAG) metabolism (Rattus norvegicus)
HS-GAG biosynthesis (Rattus norvegicus)
NDST1-4 N-deacetylates GlcNAc residues in heparan (Rattus norvegicus)
Heparan(4)-PGs [Golgi lumen] (Rattus norvegicus)
Gpc4 [Golgi lumen] (Rattus norvegicus)
NDST1-4 can sulfate a glucosamine residue in heparan to form heparan sulfate (HS) (Rattus norvegicus)
Heparan(4)-PGs [Golgi lumen] (Rattus norvegicus)
Gpc4 [Golgi lumen] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:Q642B0
Gene Names
Gpc4
Reference Genes
BioGPS Gene:317322 Gpc4
ENSEMBL:ENSRNOG00000002413
ENSEMBL:ENSRNOG00000002413.7 Gpc4
KEGG Gene (Rattus norvegicus):317322 Gpc4
Monarch:317322 Gpc4
NCBI Gene:317322 Gpc4
Reference Transcript
RefSeq:NM_001014108.1 Gpc4
RefSeq:XM_006257580.3 Gpc4
Other Identifiers
10939744
1392888_at
17879304
317322
5701219
5706358
5710900
5742383
5836063
5978963
5986915
5996858
6000236
6025960
6160673
6393907
6691198
A_42_P547976
A_43_P21658
GE1242550
GE13839
GO:0005886
GO:0007155
GO:0009966
GO:0023052
GO:0030312
GO:0031012
GO:0034330
GO:0045202
GO:0062023
GO:0098978
GO:0099560
ILMN_1650537
PH_rn_0008535
rc_AI071251_at
Participates
as a member of
Heparan(4)-PGs [Golgi lumen] (Rattus norvegicus)
Other forms of this molecule
Gpc4 [lysosomal lumen]
Gpc4 [lysosomal lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [plasma membrane]
Gpc4 [plasma membrane]
Gpc4 [plasma membrane]
Gpc4 [plasma membrane]
Gpc4 [plasma membrane]
Gpc4 [plasma membrane]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Gpc4 [Golgi lumen]
Inferred From
Heparan(4)-GPC4 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63651) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcN-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
XP_006257642.1
,
NP_001014130.1
Ensembl
ENSRNOP00000003282
,
ENSRNOG00000002413
,
ENSRNOT00000003282
RGD
1359399
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