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SS18L1 [nucleoplasm]
Stable Identifier
R-HSA-9727481
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Calcium-responsive transactivator, CREST_HUMAN
Locations in the PathwayBrowser
Expand all
Developmental Biology (Homo sapiens)
MITF-M-regulated melanocyte development (Homo sapiens)
MITF-M-dependent gene expression (Homo sapiens)
Regulation of MITF-M-dependent genes involved in pigmentation (Homo sapiens)
MITF-M and the SWI/SNF complex bind the TYR promoter (Homo sapiens)
BAF complex [nucleoplasm] (Homo sapiens)
SS18,SS18L1 [nucleoplasm] (Homo sapiens)
SS18L1 [nucleoplasm] (Homo sapiens)
M-MITF dimer:BAF complex:TYR gene [nucleoplasm] (Homo sapiens)
BAF complex [nucleoplasm] (Homo sapiens)
SS18,SS18L1 [nucleoplasm] (Homo sapiens)
SS18L1 [nucleoplasm] (Homo sapiens)
MITF-M dimer and the SWI/SNF complex bind the TYRP1 promoter (Homo sapiens)
BAF complex [nucleoplasm] (Homo sapiens)
SS18,SS18L1 [nucleoplasm] (Homo sapiens)
SS18L1 [nucleoplasm] (Homo sapiens)
MITF-M dimer:BAF complex:TYRP1 gene [nucleoplasm] (Homo sapiens)
BAF complex [nucleoplasm] (Homo sapiens)
SS18,SS18L1 [nucleoplasm] (Homo sapiens)
SS18L1 [nucleoplasm] (Homo sapiens)
MITF-M-dependent TYR gene expression (Homo sapiens)
M-MITF dimer:BAF complex:TYR gene [nucleoplasm] (Homo sapiens)
BAF complex [nucleoplasm] (Homo sapiens)
SS18,SS18L1 [nucleoplasm] (Homo sapiens)
SS18L1 [nucleoplasm] (Homo sapiens)
MITF-M-dependent TYRP1 gene expression (Homo sapiens)
MITF-M dimer:BAF complex:TYRP1 gene [nucleoplasm] (Homo sapiens)
BAF complex [nucleoplasm] (Homo sapiens)
SS18,SS18L1 [nucleoplasm] (Homo sapiens)
SS18L1 [nucleoplasm] (Homo sapiens)
Gene expression (Transcription) (Homo sapiens)
Epigenetic regulation of gene expression (Homo sapiens)
Regulation of endogenous retroelements (Homo sapiens)
Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs) (Homo sapiens)
DNMT3A:DNMT3L in nascent RNA transcript:MeR-PIWIL4:2'-O-methyl-piRNA:SPOCD1:DNMT3A:DNMT3L methylates cytosine in DNA (Homo sapiens)
nascent LINE-1 RNA transcript:MeR-PIWIL4:2'-O-methyl-piRNA:SPOCD1:DNMT3A:DNMT3L [nucleoplasm] (Homo sapiens)
BAF complex [nucleoplasm] (Homo sapiens)
SS18,SS18L1 [nucleoplasm] (Homo sapiens)
SS18L1 [nucleoplasm] (Homo sapiens)
PIWIL4:piRNA binds nascent LINE1 pre-RNA and recruits SPOCD1, C19ORF84, DNMT3A, DNMT3L, the NURD complex, and the BAF complex (Homo sapiens)
BAF complex [nucleoplasm] (Homo sapiens)
SS18,SS18L1 [nucleoplasm] (Homo sapiens)
SS18L1 [nucleoplasm] (Homo sapiens)
nascent LINE-1 RNA transcript:MeR-PIWIL4:2'-O-methyl-piRNA:SPOCD1:DNMT3A:DNMT3L [nucleoplasm] (Homo sapiens)
BAF complex [nucleoplasm] (Homo sapiens)
SS18,SS18L1 [nucleoplasm] (Homo sapiens)
SS18L1 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:O75177 SS18L1
Gene Names
SS18L1, CREST, KIAA0693
Chain
chain:1-396
Reference Genes
BioGPS Gene:26039 SS18L1
COSMIC (genes):SS18L1 SS18L1
CTD Gene:26039 SS18L1
dbSNP Gene:26039 SS18L1
ENSEMBL:ENSG00000184402 SS18L1
ENSEMBL_homo_sapiens_GENE:ENSG00000184402.15 SS18L1
HGNC:15592 SS18L1
KEGG Gene (Homo sapiens):26039 SS18L1
Monarch:26039 SS18L1
NCBI Gene:26039 SS18L1
OMIM:606472 SS18L1
UCSC:O75177 SS18L1
Reference Transcript
RefSeq:NM_198935.2 SS18L1
RefSeq:XM_011528764.2 SS18L1
RefSeq:NM_001301778.1 SS18L1
RefSeq:XM_011528767.1 SS18L1
RefSeq:XM_005260391.1 SS18L1
Other Identifiers
11739668_a_at
11739669_at
16915590
213140_PM_s_at
213140_s_at
26039
31903_at
3892457
3892458
3892464
3892467
3892468
3892470
3892471
3892472
3892473
3892479
3892483
3892485
3892486
3892487
3892488
3892489
3892490
3892510
3892511
3892512
3892513
3892514
3892554
8063839
A_14_P138445
A_23_P423926
A_32_P139654
GE53395
GO:0000775
GO:0000776
GO:0000779
GO:0003713
GO:0005515
GO:0005634
GO:0005654
GO:0005694
GO:0005829
GO:0006325
GO:0006351
GO:0006355
GO:0016358
GO:0030154
GO:0043226
GO:0045893
GO:0045944
GO:0048856
GO:0050775
GO:0071565
GO:0140110
HMNXSV003027889
HMNXSV003042410
Hs.154429.0.S1_3p_a_at
ILMN_1676625
ILMN_1715500
PH_hs_0009296
TC20000483.hg
Participates
as a member of
SS18,SS18L1 [nucleoplasm] (Homo sapiens)
Cross References
RefSeq
NP_945173.1
,
NP_001288707.1
,
XP_011527066.1
,
XP_005260448.1
,
XP_011527069.1
OpenTargets
ENSG00000184402
HPA
ENSG00000184402-SS18L1
GeneCards
O75177
Ensembl
ENST00000331758
,
ENST00000370848
,
ENSP00000333012
,
ENSP00000359885
,
ENSG00000184402
PRO
O75177
Pharos - Targets
O75177
Interactors (2)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q96PC5 MIA2
1
MIA2 [endoplasmic reticulum membrane]
(R-HSA-9637821)
0.556
3
UniProt:P17931 LGALS3
3
LGALS3 [ficolin-1-rich granule membrane]
(R-HSA-6803307)
LGALS3 [secretory granule membrane]
(R-HSA-6803327)
LGALS3 [plasma membrane]
(R-HSA-879445)
0.556
3
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