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LSM7 [nucleoplasm]
Stable Identifier
R-HSA-6806802
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
U6 snRNA-associated Sm-like protein LSm7, LSM7_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal B complex (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
U4:U5:U6 tri-snRNP complex [nucleoplasm] (Homo sapiens)
U4 snRNP:U6 snRNP complex [nucleoplasm] (Homo sapiens)
U6 snRNP [nucleoplasm] (Homo sapiens)
LSM2-8 complex [nucleoplasm] (Homo sapiens)
LSM7 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal Bact complex (Homo sapiens)
LSM2-8 complex [nucleoplasm] (Homo sapiens)
LSM7 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal Pre-B complex (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
U4:U5:U6 tri-snRNP complex [nucleoplasm] (Homo sapiens)
U4 snRNP:U6 snRNP complex [nucleoplasm] (Homo sapiens)
U6 snRNP [nucleoplasm] (Homo sapiens)
LSM2-8 complex [nucleoplasm] (Homo sapiens)
LSM7 [nucleoplasm] (Homo sapiens)
U4:U5:U6 tri-snRNP complex [nucleoplasm] (Homo sapiens)
U4 snRNP:U6 snRNP complex [nucleoplasm] (Homo sapiens)
U6 snRNP [nucleoplasm] (Homo sapiens)
LSM2-8 complex [nucleoplasm] (Homo sapiens)
LSM7 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9UK45 LSM7
Gene Names
LSM7
Chain
initiator methionine:, chain:2-103
Reference Genes
BioGPS Gene:51690 LSM7
COSMIC (genes):LSM7 LSM7
CTD Gene:51690 LSM7
dbSNP Gene:51690 LSM7
ENSEMBL:ENSG00000130332 LSM7
HGNC:20470 LSM7
KEGG:hsa:51690 LSM7
Monarch:51690 LSM7
NCBI Gene:51690 LSM7
OMIM:607287 LSM7
UCSC:Q9UK45 LSM7
Reference Transcript
RefSeq:NM_016199.2 LSM7
Other Identifiers
11719720_s_at
11719721_x_at
16866940
204559_PM_s_at
204559_s_at
36846_s_at
36847_r_at
36848_r_at
3845869
3845870
3845873
3845874
3845875
3845877
3845878
3845879
3845880
3845881
3845882
3845883
3845884
51690
8032480
A_23_P90463
GE79282
GO:0000398
GO:0000956
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005681
GO:0005688
GO:0005689
GO:0005829
GO:0006397
GO:0008380
GO:0016071
GO:0017070
GO:0043226
GO:0046540
GO:0071004
GO:0071005
GO:0071013
GO:0097526
GO:0120115
GO:1990726
HMNXSV003043214
ILMN_1678165
PH_hs_0026772
TC19001028.hg
g7706422_3p_a_at
Participates
as a component of
LSM2-8 complex [nucleoplasm] (Homo sapiens)
Other forms of this molecule
LSM7 [cytosol]
Inferred To
LSm7 [nucleoplasm]
(Drosophila melanogaster)
Lsm7 [nucleoplasm]
(Mus musculus)
Lsm7 [nucleoplasm]
(Rattus norvegicus)
lsm-7 [nucleoplasm]
(Caenorhabditis elegans)
lsm7 [nucleoplasm]
(Dictyostelium discoideum)
lsm7 [nucleoplasm]
(Schizosaccharomyces pombe)
Ghost homologue of LSM7 [nucleoplasm]
(Gallus gallus)
Ghost homologue of LSM7 [nucleoplasm]
(Xenopus tropicalis)
LSM7 [nucleoplasm]
(Bos taurus)
LSM7 [nucleoplasm]
(Canis familiaris)
LSM7 [nucleoplasm]
(Plasmodium falciparum)
LSM7 [nucleoplasm]
(Sus scrofa)
Cross References
ENSEMBL
ENSG00000130332
,
ENST00000252622
,
ENSP00000252622
OpenTargets
ENSG00000130332
GeneCards
LSM7
HPA
ENSG00000130332-LSM7
PRO
Q9UK45
Pharos - Targets
Q9UK45
PDB
8QZS
,
8QXD
,
6AHD
,
8R08
,
6QX9
,
5O9Z
,
7ABG
,
3JCR
,
6AH0
,
8H6K
,
8R0B
,
6QW6
,
8H6L
,
8H6E
,
8RM5
,
8H6J
,
8QO9
,
8R09
,
8R0A
Interactors (4)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P62306 SNRPF
2
SNRPF [cytosol]
(R-HSA-191852)
SNRPF [nucleoplasm]
(R-HSA-71907)
0.743
7
UniProt:P62318 SNRPD3
3
2xMe-SNRPD3 [cytosol]
(R-HSA-191781)
2xMe-SNRPD3 [nucleoplasm]
(R-HSA-192219)
SNRPD3 [nucleoplasm]
(R-HSA-71903)
0.668
3
UniProt:P62316 SNRPD2
2
SNRPD2 [cytosol]
(R-HSA-191810)
SNRPD2 [nucleoplasm]
(R-HSA-71901)
0.527
2
UniProt:P14678 SNRPB
4
2xMe-SNRPB [cytosol]
(R-HSA-192218)
SNRPB [cytosol]
(R-HSA-191798)
Me2-R108,R112-SNRPB [nucleoplasm]
(R-HSA-192213)
SNRPB [nucleoplasm]
(R-HSA-71896)
0.527
2
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