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UTP6 [nucleoplasm]
Stable Identifier
R-HSA-6790674
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
U3 small nucleolar RNA-associated protein 6 homolog, UTP6_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
rRNA processing (Homo sapiens)
rRNA processing in the nucleus and cytosol (Homo sapiens)
Major pathway of rRNA processing in the nucleolus and cytosol (Homo sapiens)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA (Homo sapiens)
18SE pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPB complex [nucleoplasm] (Homo sapiens)
UTP6 [nucleoplasm] (Homo sapiens)
21S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPB complex [nucleoplasm] (Homo sapiens)
UTP6 [nucleoplasm] (Homo sapiens)
30S pre-rRNA is nucleolytically processed at site 1 to yield 21S pre-rRNA (Homo sapiens)
21S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPB complex [nucleoplasm] (Homo sapiens)
UTP6 [nucleoplasm] (Homo sapiens)
30S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPB complex [nucleoplasm] (Homo sapiens)
UTP6 [nucleoplasm] (Homo sapiens)
45S pre-rRNA is nucleolytically processed at site 2 (site 2b) to yield 30S pre-rRNA and 32S pre-rRNA (Homo sapiens)
30S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPB complex [nucleoplasm] (Homo sapiens)
UTP6 [nucleoplasm] (Homo sapiens)
45S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPB complex [nucleoplasm] (Homo sapiens)
UTP6 [nucleoplasm] (Homo sapiens)
47S pre-rRNA is nucleolytically processed at A' (01,A1), site A0, and site 02 (site 6) to yield 45S pre-rRNA (Homo sapiens)
45S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPB complex [nucleoplasm] (Homo sapiens)
UTP6 [nucleoplasm] (Homo sapiens)
47S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPB complex [nucleoplasm] (Homo sapiens)
UTP6 [nucleoplasm] (Homo sapiens)
rRNA modification in the nucleus and cytosol (Homo sapiens)
EMG1 of the SSU processome methylates pseudouridine-1248 of 18S rRNA yielding N(1)-methylpseudouridine-1248 (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPB complex [nucleoplasm] (Homo sapiens)
UTP6 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9NYH9 UTP6
Gene Names
UTP6, C17orf40, HCA66, MHAT
Chain
chain:1-597
Reference Genes
BioGPS Gene:55813 UTP6
COSMIC (genes):UTP6 UTP6
CTD Gene:55813 UTP6
dbSNP Gene:55813 UTP6
ENSEMBL:ENSG00000108651 UTP6
HGNC:18279 UTP6
KEGG:hsa:55813 UTP6
Monarch:55813 UTP6
NCBI Gene:55813 UTP6
OMIM:620948 UTP6
UCSC:Q9NYH9 UTP6
Reference Transcript
RefSeq:NM_018428.2 UTP6
Other Identifiers
11733343_a_at
11747291_a_at
16843187
218715_PM_at
218715_at
3624325
3752434
3752435
3752436
3752438
3752439
3752440
3752441
3752442
3752443
3752444
3752445
3752446
3752447
3752448
3752449
3752450
3752451
3752452
3752454
3752455
3752457
3752459
3752461
3752462
3752463
3752464
3752465
3752466
3752467
3752468
3752469
3752470
3752472
3752473
3752474
42285_at
44861_at
50166_at
55813
71126_at
8014081
A_23_P164237
GE55315
GE561348
GO:0000462
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005694
GO:0005730
GO:0006364
GO:0006396
GO:0030515
GO:0032040
GO:0034388
GO:0042274
GO:0043226
HMNXSV003017487
HMNXSV003045090
ILMN_1778238
PH_hs_0032189
TC17001346.hg
g8923721_3p_at
Participates
as a component of
UTPB complex [nucleoplasm] (Homo sapiens)
Inferred To
Dmel\CG7246 [nucleoplasm]
(Drosophila melanogaster)
UTP6 [nucleoplasm]
(Bos taurus)
UTP6 [nucleoplasm]
(Canis familiaris)
UTP6 [nucleoplasm]
(Gallus gallus)
UTP6 [nucleoplasm]
(Plasmodium falciparum)
UTP6 [nucleoplasm]
(Saccharomyces cerevisiae)
UTP6 [nucleoplasm]
(Sus scrofa)
Ghost homologue of UTP6 [nucleoplasm]
(Caenorhabditis elegans)
utp6 [nucleoplasm]
(Dictyostelium discoideum)
utp6 [nucleoplasm]
(Schizosaccharomyces pombe)
Utp6 [nucleoplasm]
(Mus musculus)
Utp6 [nucleoplasm]
(Rattus norvegicus)
Cross References
RefSeq
NP_060898.2
ENSEMBL
ENST00000261708
,
ENSP00000261708
,
ENSG00000108651
OpenTargets
ENSG00000108651
GeneCards
UTP6
HPA
ENSG00000108651-UTP6
PRO
Q9NYH9
Pharos - Targets
Q9NYH9
PDB
7MQ9
,
7MQ8
,
7MQA
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P42858 HTT
1
HTT [nucleoplasm]
(R-HSA-9023590)
0.556
3
UniProt:P02649 APOE
10
APOE [extracellular region]
(R-HSA-174646)
APOE [endoplasmic reticulum lumen]
(R-HSA-6784908)
p-APOE [endoplasmic reticulum lumen]
(R-HSA-8956980)
APOE [endocytic vesicle lumen]
(R-HSA-3221641)
APOE-4 [extracellular region]
(R-HSA-9711070)
APOE [plasma membrane]
(R-HSA-174615)
APOE [clathrin-coated endocytic vesicle membrane]
(R-HSA-174651)
APOE [endosome membrane]
(R-HSA-174766)
APOE [endosome lumen]
(R-HSA-174804)
APOE [early endosome]
(R-HSA-2429687)
0.556
3
UniProt:P24394 IL4R
2
p-Y-IL4R [plasma membrane]
(R-HSA-6786087)
IL4R [plasma membrane]
(R-HSA-449670)
0.527
2
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