Reactome | rprd1a [nucleoplasm]

rprd1a [nucleoplasm]

Stable Identifier

R-XTR-6814899

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

nucleoplasm

Synonyms

RPRD1A, F6PM62

Locations in the PathwayBrowser

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Gene expression (Transcription) (Xenopus tropicalis)

- RNA Polymerase II Transcription (Xenopus tropicalis)
  - RNA polymerase II transcribes snRNA genes (Xenopus tropicalis)
    - Integrator complex processes the 3' end of snRNA (Xenopus tropicalis)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Xenopus tropicalis)
        
        RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B:RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        rprd1a [nucleoplasm] (Xenopus tropicalis)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Xenopus tropicalis)
        
        RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B:RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        rprd1a [nucleoplasm] (Xenopus tropicalis)
    - Pre-snRNA is elongated and capped with 7-methylguanosine (Xenopus tropicalis)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Xenopus tropicalis)
        
        RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B:RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        rprd1a [nucleoplasm] (Xenopus tropicalis)
      - RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Xenopus tropicalis)
        
        RNA polymerase II (phospho-Ser5,7 CTD):RDRP1A,B:RDRP2:RPAP2:Integrator:LEC [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B:RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        rprd1a [nucleoplasm] (Xenopus tropicalis)
    - RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain (Xenopus tropicalis)
      - RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Xenopus tropicalis)
        
        RNA polymerase II (phospho-Ser5,7 CTD):RPRD1A,B:RPRD2:RPAP2 [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B:RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        rprd1a [nucleoplasm] (Xenopus tropicalis)
      - RPRD1A,B:RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        RPRD1A,B [nucleoplasm] (Xenopus tropicalis)
        
        rprd1a [nucleoplasm] (Xenopus tropicalis)

External Reference Information

External Reference

UniProt:F6PM62

Gene Names

rprd1a

Reference Genes

BioGPS Gene:100380115 rprd1a

ENSEMBL:ENSXETG00000021931

KEGG:xtr:100380115 rprd1a

Monarch:100380115 rprd1a

NCBI Gene:100380115 rprd1a

UCSC:F6PM62 rprd1a

Reference Transcript

RefSeq:XM_002941320.5 rprd1a

Other Identifiers

100380115

GO:0000993

GO:0001111

GO:0005634

GO:0005654

GO:0016071

GO:0031124

GO:0042802

GO:0097550

GO:0099122

Participates

as a member of

RPRD1A,B [nucleoplasm] (Xenopus tropicalis)

Inferred From

RPRD1A [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

XP_002941366.1

ENSEMBL

ENSXETT00000047457, ENSXETG00000021931, ENSXETP00000047457

Xenbase

XB-GENE-5808367