Reactome | gpc6 [Golgi lumen]

gpc6 [Golgi lumen]

Stable Identifier

R-XTR-2076415

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

Golgi lumen

Synonyms

Heparan(2)-GPC6, A0A803K187

External Reference Information

External Reference

UniProt:A0A803K187

Gene Names

gpc6

Reference Genes

BioGPS Gene:100491173 gpc6

ENSEMBL:ENSXETG00000039039

KEGG:xtr:100491173 gpc6

Monarch:100491173 gpc6

NCBI Gene:100491173 gpc6

UCSC:A0A803K187 gpc6

Reference Transcript

RefSeq:XM_012957513.3 gpc6

Other Identifiers

100491173

GO:0005886

GO:0009966

GO:0009986

GO:0016020

GO:0016477

GO:0045202

GO:0048870

GO:0098552

GO:1905475

Participates

as a member of

Heparan(2)-PGs [Golgi lumen] (Xenopus tropicalis)

Other forms of this molecule

gpc6 [plasma membrane]

gpc6 [Golgi lumen]

gpc6 [lysosomal lumen]

gpc6 [Golgi lumen]

Inferred From

Heparan(2)-GPC6 [Golgi lumen] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63648) at unknown position

Modification

alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

XP_012812967.2

ENSEMBL

ENSXETP00000114084, ENSXETG00000039039, ENSXETT00000117592

Xenbase

XB-GENE-6037689

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