Reactome | col4a2 [endoplasmic reticulum lumen]

col4a2 [endoplasmic reticulum lumen]

Stable Identifier

R-XTR-2023568

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

endoplasmic reticulum lumen

Synonyms

3x4Hyp-3Hyp-GalHyl-COL4A2(26-1712), F6TF09

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:F6TF09

Gene Names

col4a2

Reference Genes

BioGPS Gene:100486079 col4a2

ENSEMBL:ENSXETG00000002635

KEGG:xtr:100486079 col4a2

Monarch:100486079 col4a2

NCBI Gene:100486079 col4a2

UCSC:F6TF09 col4a2

Reference Transcript

Other Identifiers

100486079

GO:0005198

GO:0005201

GO:0005581

GO:0005604

GO:0016020

GO:0030312

GO:0031012

Participates

as a candidate of

3,4-Hyp 5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)

as a component of

C-linked procollagen alpha-1(IV)X2 alpha-2(IV) trimer [endoplasmic reticulum lumen] (Xenopus tropicalis)

Other forms of this molecule

col4a2 [endoplasmic reticulum lumen]

col4a2 [extracellular region]

Inferred From

Alpha-2(IV) chains [endoplasmic reticulum lumen] (Homo sapiens)

3x4Hyp-3Hyp-GalHyl-COL4A2(26-1712) [endoplasmic reticulum lumen] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

XP_002933063.2, XP_031752901.1, XP_004912044.1, XP_031752900.1

ENSEMBL

ENSXETT00000005650, ENSXETP00000005650

Xenbase

XB-GENE-5950101

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