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PHF5A [nucleoplasm]
Stable Identifier
R-SSC-66652
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
nucleoplasm
Synonyms
PHF5A, A0A286ZJW8
Locations in the PathwayBrowser
Expand all
Chromatin organization (Sus scrofa)
ATP-dependent chromatin remodelers (Sus scrofa)
CHD chromatin remodelers (Sus scrofa)
CHD1 and CHD2 subfamily (Sus scrofa)
CHD1:H3K4me3 interacts with post-initiation transcription complexes (Sus scrofa)
CHD1:H3K4 nucleosome:FACT complex:U2 snRNP complex:PAF1C complex [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Metabolism of RNA (Sus scrofa)
Processing of Capped Intron-Containing Pre-mRNA (Sus scrofa)
mRNA 3'-end processing (Sus scrofa)
mRNA Polyadenylation (Sus scrofa)
Core CPA complex binds capped pre-mRNA (Sus scrofa)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Sus scrofa)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Sus scrofa)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Sus scrofa)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
PP1 dephosphorylates RNA Pol II (Sus scrofa)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
RBBP6 activates CPSF complex (Sus scrofa)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
U2 snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
mRNA Splicing (Sus scrofa)
mRNA Splicing - Major Pathway (Sus scrofa)
Formation of the Spliceosomal C complex containing intron lariat (Sus scrofa)
Spliceosomal B* complex [nucleoplasm] (Sus scrofa)
U2 12S snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Spliceosomal C complex [nucleoplasm] (Sus scrofa)
U2 12S snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Formation of the Spliceosomal C* complex (Sus scrofa)
Spliceosomal C complex [nucleoplasm] (Sus scrofa)
U2 12S snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Spliceosomal C* complex [nucleoplasm] (Sus scrofa)
U2 12S snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Formation of the Spliceosomal P complex and exon ligation (Sus scrofa)
Spliceosomal C* complex [nucleoplasm] (Sus scrofa)
U2 12S snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Spliceosomal P complex [nucleoplasm] (Sus scrofa)
U2 12S snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Sus scrofa)
Intron Lariat Spliceosome (ILS) [nucleoplasm] (Sus scrofa)
U2 12S snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
Spliceosomal P complex [nucleoplasm] (Sus scrofa)
U2 12S snRNP [nucleoplasm] (Sus scrofa)
PHF5A [nucleoplasm] (Sus scrofa)
External Reference Information
External Reference
UniProt:A0A286ZJW8
Gene Names
PHF5A
Reference Genes
BioGPS Gene:110260628 PHF5A
ENSEMBL:ENSSSCG00000035082.3
KEGG:ssc:110260628 PHF5A
Monarch:110260628 PHF5A
NCBI Gene:110260628 PHF5A
UCSC:A0A286ZJW8 PHF5A
Reference Transcript
RefSeq:XM_021091456.1 PHF5A
Other Identifiers
110260628
GO:0000398
GO:0003723
GO:0005634
GO:0005654
GO:0005684
GO:0005686
GO:0005689
GO:0008270
GO:0016071
GO:0016363
GO:0016607
GO:0030154
GO:0048863
GO:0071005
GO:0071011
Ssc.4115.1.S1_at
Participates
as a component of
U2 snRNP [nucleoplasm] (Sus scrofa)
U2 12S snRNP [nucleoplasm] (Sus scrofa)
Inferred From
PHF5A [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_020947115.1
ENSEMBL
ENSSSCT00000053608
,
ENSSSCP00000031765
,
ENSSSCG00000035082
VGNC
91388
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