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PHF5A [nucleoplasm]
Stable Identifier
R-HSA-66652
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
SF3b14b, Hypothetical protein BK223H9.2/MGC1346, Hypothetical UPF0123 protein BK223H9.2/MGC1346
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Disassembly of the Intron Lariat Spliceosome (new) (Homo sapiens)
Intron Lariat Spliceosome (ILS) [nucleoplasm] (Homo sapiens)
U2 12S snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
U2 12S snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal A complex (update) (Homo sapiens)
Spliceosomal A complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal B complex (new) (Homo sapiens)
Spliceosomal B complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal B* complex (new) (Homo sapiens)
Spliceosomal B* complex [nucleoplasm] (Homo sapiens)
U2 12S snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Spliceosomal Bact complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal Bact complex (new) (Homo sapiens)
Spliceosomal B complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Spliceosomal Bact complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal C* complex (update) (Homo sapiens)
Spliceosomal C complex [nucleoplasm] (Homo sapiens)
U2 12S snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Spliceosomal C* complex [nucleoplasm] (Homo sapiens)
U2 12S snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal P complex and exon ligation (new) (Homo sapiens)
Spliceosomal C* complex [nucleoplasm] (Homo sapiens)
U2 12S snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Spliceosomal P complex [nucleoplasm] (Homo sapiens)
U2 12S snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal Pre-B complex (new) (Homo sapiens)
Spliceosomal A complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Homo sapiens)
Intron Lariat Spliceosome (ILS) [nucleoplasm] (Homo sapiens)
U2 12S snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
Spliceosomal P complex [nucleoplasm] (Homo sapiens)
U2 12S snRNP [nucleoplasm] (Homo sapiens)
PHF5A [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q7RTV0 PHF5A
Gene Names
PHF5A
Chain
initiator methionine:1, chain:2-110
Reference Genes
BioGPS Gene:84844 PHF5A
COSMIC (genes):PHF5A PHF5A
CTD Gene:84844 PHF5A
dbSNP Gene:84844 PHF5A
ENSEMBL:ENSG00000100410.8 PHF5A
HGNC:18000 PHF5A
KEGG Gene (Homo sapiens):84844 PHF5A
Monarch:84844 PHF5A
NCBI Gene:84844 PHF5A
OMIM:617846 PHF5A
UCSC:Q7RTV0 PHF5A
Reference Transcript
RefSeq:NM_032758.3 PHF5A
Other Identifiers
0003840551
11717782_s_at
11717783_x_at
16935432
225309_PM_at
225309_at
3961956
3961957
3961962
3961964
3961965
57123_at
8076339
84844
A_23_P253571
GE79625
GO:0000398
GO:0003677
GO:0003723
GO:0005515
GO:0005622
GO:0005634
GO:0005654
GO:0005681
GO:0005684
GO:0005686
GO:0005689
GO:0006351
GO:0006355
GO:0006397
GO:0008270
GO:0008380
GO:0016071
GO:0016363
GO:0016607
GO:0030154
GO:0032991
GO:0043226
GO:0045893
GO:0046872
GO:0048863
GO:0065003
GO:0071005
GO:0071011
GO:1903241
HMNXSV003001974
Hs.273234.0.A1_3p_at
ILMN_1775901
ILMN_2112402
PH_hs_0029568
TC22000826.hg
Participates
as a component of
U2 snRNP [nucleoplasm] (Homo sapiens)
U2 12S snRNP [nucleoplasm] (Homo sapiens)
Inferred To
Phf5a [nucleoplasm]
(Drosophila melanogaster)
phf5a [nucleoplasm]
(Xenopus tropicalis)
PHF5A [nucleoplasm]
(Bos taurus)
PHF5A [nucleoplasm]
(Canis familiaris)
PHF5A [nucleoplasm]
(Dictyostelium discoideum)
PHF5A [nucleoplasm]
(Gallus gallus)
PHF5A [nucleoplasm]
(Mus musculus)
PHF5A [nucleoplasm]
(Plasmodium falciparum)
PHF5A [nucleoplasm]
(Rattus norvegicus)
PHF5A [nucleoplasm]
(Sus scrofa)
phf-5 [nucleoplasm]
(Caenorhabditis elegans)
chunp6910 [nucleoplasm]
(Danio rerio)
ini1 [nucleoplasm]
(Schizosaccharomyces pombe)
Cross References
RefSeq
NP_116147.1
OpenTargets
ENSG00000100410
HPA
ENSG00000100410-PHF5A
GeneCards
Q7RTV0
Ensembl
ENSP00000216252
,
ENSG00000100410
,
ENST00000216252
PRO
Q7RTV0
Pharos - Targets
Q7RTV0
PDB
5Z57
,
6EN4
,
5Z56
,
5ZYA
,
7B91
,
7OMF
,
6Y50
,
7ABH
,
5O9Z
,
7DVQ
,
5SYB
,
5Z58
,
7OPI
,
7B0I
,
7ABG
,
6AHD
,
7Q3L
,
6Y5Q
,
7Q4O
,
7ONB
,
6FF4
,
7Q4P
,
7B9C
,
7B92
,
7ABI
,
6QX9
,
6AH0
,
5IFE
,
6FF7
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:O76024 WFS1
3
WFS1 [endoplasmic reticulum lumen]
(R-HSA-8956747)
p-WFS1 [endoplasmic reticulum lumen]
(R-HSA-8956998)
WFS1 [endoplasmic reticulum membrane]
(R-HSA-535474)
0.556
3
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