Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
SDC4 [Golgi lumen]
Stable Identifier
R-SSC-2076613
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
Golgi lumen
Synonyms
Heparan(4)-SDC4, Q8HZJ6
Locations in the PathwayBrowser
Expand all
Metabolism (Sus scrofa)
Metabolism of carbohydrates (Sus scrofa)
Glycosaminoglycan metabolism (Sus scrofa)
Heparan sulfate/heparin (HS-GAG) metabolism (Sus scrofa)
HS-GAG biosynthesis (Sus scrofa)
NDST1-4 N-deacetylates GlcNAc residues in heparan (Sus scrofa)
Heparan(4)-PGs [Golgi lumen] (Sus scrofa)
SDC4 [Golgi lumen] (Sus scrofa)
NDST1-4 can sulfate a glucosamine residue in heparan to form heparan sulfate (HS) (Sus scrofa)
Heparan(4)-PGs [Golgi lumen] (Sus scrofa)
SDC4 [Golgi lumen] (Sus scrofa)
External Reference Information
External Reference
UniProt:Q8HZJ6
Gene Names
SDC4
Reference Genes
BioGPS Gene:397528 SDC4
ENSEMBL:ENSSSCG00040017528.1
ENSEMBL:ENSSSCG00070012642.1 SDC4
KEGG Gene (Sus scrofa):397528 SDC4
Monarch:397528 SDC4
NCBI Gene:397528 SDC4
Reference Transcript
RefSeq:NM_214284.1 SDC4
Participates
as a member of
Heparan(4)-PGs [Golgi lumen] (Sus scrofa)
Other forms of this molecule
SDC4 [lysosomal lumen]
SDC4 [lysosomal lumen]
SDC4 [plasma membrane]
SDC4 [plasma membrane]
SDC4 [plasma membrane]
SDC4 [plasma membrane]
SDC4 [plasma membrane]
SDC4 [plasma membrane]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
Inferred From
Heparan(4)-SDC4 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63651) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcN-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_999449.1
OpenTargets
ENSG00000124145
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text