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SDC4 [Golgi lumen]
Stable Identifier
R-SSC-2076510
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
Golgi lumen
Synonyms
HS(5)-SDC4, Q8HZJ6
Locations in the PathwayBrowser
Expand all
Metabolism (Sus scrofa)
Metabolism of carbohydrates (Sus scrofa)
Glycosaminoglycan metabolism (Sus scrofa)
Heparan sulfate/heparin (HS-GAG) metabolism (Sus scrofa)
HS-GAG biosynthesis (Sus scrofa)
HS6STs sulfate GlcN at C6 in heparan sulfate/heparin (Sus scrofa)
HS(5)-PGs [Golgi lumen] (Sus scrofa)
SDC4 [Golgi lumen] (Sus scrofa)
Some HSPGs are secreted to the plasma membrane (Sus scrofa)
HSPGs [Golgi lumen] (Sus scrofa)
HS(5)-PGs [Golgi lumen] (Sus scrofa)
SDC4 [Golgi lumen] (Sus scrofa)
External Reference Information
External Reference
UniProt:Q8HZJ6
Gene Names
SDC4
Reference Genes
BioGPS Gene:397528 SDC4
ENSEMBL:ENSSSCG00040017528.1
ENSEMBL:ENSSSCG00070012642.1 SDC4
KEGG Gene (Sus scrofa):397528 SDC4
Monarch:397528 SDC4
NCBI Gene:397528 SDC4
Reference Transcript
RefSeq:NM_214284.1 SDC4
Participates
as a member of
HS(5)-PGs [Golgi lumen] (Sus scrofa)
Other forms of this molecule
SDC4 [lysosomal lumen]
SDC4 [lysosomal lumen]
SDC4 [plasma membrane]
SDC4 [plasma membrane]
SDC4 [plasma membrane]
SDC4 [plasma membrane]
SDC4 [plasma membrane]
SDC4 [plasma membrane]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
SDC4 [Golgi lumen]
Inferred From
HS(5)-SDC4 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63661) at unknown position
Modification
beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_999449.1
OpenTargets
ENSG00000124145
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