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cwf3 [nucleoplasm]
Stable Identifier
R-SPO-67411
Type
Protein [EntityWithAccessionedSequence]
Species
Schizosaccharomyces pombe
Compartment
nucleoplasm
Synonyms
XAB2, Q9P7R9
Locations in the PathwayBrowser
Expand all
DNA Repair (Schizosaccharomyces pombe)
Nucleotide Excision Repair (Schizosaccharomyces pombe)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Schizosaccharomyces pombe)
Dual incision in TC-NER (Schizosaccharomyces pombe)
3' incision by ERCC5 (XPG) in TC-NER (Schizosaccharomyces pombe)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Schizosaccharomyces pombe)
TC-NER incision complex [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER (Schizosaccharomyces pombe)
TC-NER incision complex [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
DNA polymerases delta, epsilon or kappa bind the TC-NER site (Schizosaccharomyces pombe)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Schizosaccharomyces pombe)
TC-NER pre-incision complex [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Schizosaccharomyces pombe)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
Gap-filling DNA repair synthesis and ligation in TC-NER (Schizosaccharomyces pombe)
Ligation of newly synthesized repair patch to incised DNA in TC-NER (Schizosaccharomyces pombe)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER (Schizosaccharomyces pombe)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
Metabolism of RNA (Schizosaccharomyces pombe)
Processing of Capped Intron-Containing Pre-mRNA (Schizosaccharomyces pombe)
mRNA Splicing (Schizosaccharomyces pombe)
mRNA Splicing - Major Pathway (Schizosaccharomyces pombe)
Formation of the Spliceosomal C complex containing intron lariat (Schizosaccharomyces pombe)
Spliceosomal B* complex [nucleoplasm] (Schizosaccharomyces pombe)
PRP19-CDC5L related complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
Spliceosomal C complex [nucleoplasm] (Schizosaccharomyces pombe)
PRP19-CDC5L related complex [nucleoplasm] (Schizosaccharomyces pombe)
cwf3 [nucleoplasm] (Schizosaccharomyces pombe)
External Reference Information
External Reference
UniProt:Q9P7R9
Gene Names
cwf3
Reference Genes
BioGPS Gene:2540753 cwf3
ENSEMBL:SPBC211.02c
KEGG:spo:2540753 cwf3
Monarch:2540753 cwf3
NCBI Gene:2540753 cwf3
PomBase:SPBC211.02c
UCSC:Q9P7R9 cwf3
Reference Transcript
RefSeq:NM_001022533.2 cwf3
Participates
as a component of
XAB2 complex [nucleoplasm] (Schizosaccharomyces pombe)
PRP19-CDC5L related complex [nucleoplasm] (Schizosaccharomyces pombe)
Inferred From
XAB2 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_596612.1
PRO
Q9P7R9
PDB
3JB9
,
9ESH
,
9ESI
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