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RNF4 [cytosol]
Stable Identifier
R-RNO-975974
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
cytosol
Synonyms
O88846
Locations in the PathwayBrowser
Expand all
Immune System (Rattus norvegicus)
Adaptive Immune System (Rattus norvegicus)
Class I MHC mediated antigen processing & presentation (Rattus norvegicus)
Antigen processing: Ubiquitination & Proteasome degradation (Rattus norvegicus)
Interaction of E3 with substrate and E2-Ub complex (Rattus norvegicus)
Ag-substrate:E3:E2:Ub [cytosol] (Rattus norvegicus)
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
RNF4 [cytosol] (Rattus norvegicus)
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
RNF4 [cytosol] (Rattus norvegicus)
Polyubiquitination of substrate (Rattus norvegicus)
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
RNF4 [cytosol] (Rattus norvegicus)
E3:K48-polyubiquitinated substrate [cytosol] (Rattus norvegicus)
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
RNF4 [cytosol] (Rattus norvegicus)
E3:Ub:substrate [cytosol] (Rattus norvegicus)
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
RNF4 [cytosol] (Rattus norvegicus)
Release of E3 from polyubiquitinated substrate (Rattus norvegicus)
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
RNF4 [cytosol] (Rattus norvegicus)
E3:K48-polyubiquitinated substrate [cytosol] (Rattus norvegicus)
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
RNF4 [cytosol] (Rattus norvegicus)
Transfer of Ub from E2 to substrate and release of E2 (Rattus norvegicus)
Ag-substrate:E3:E2:Ub [cytosol] (Rattus norvegicus)
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
RNF4 [cytosol] (Rattus norvegicus)
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
RNF4 [cytosol] (Rattus norvegicus)
E3:Ub:substrate [cytosol] (Rattus norvegicus)
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
RNF4 [cytosol] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:O88846
Reference Genes
BioGPS Gene:29274
ENSEMBL:ENSRNOG00000013930
ENSEMBL:ENSRNOG00055016978
ENSEMBL:ENSRNOG00060016549
ENSEMBL:ENSRNOG00065028885
KEGG:rno:29274
Monarch:29274
NCBI Gene:29274
UCSC:O88846
Reference Transcript
RefSeq:NM_019182.2
RefSeq:XM_008770271.2
RefSeq:XM_008770272.2
RefSeq:XM_017599145.1
RefSeq:XM_017599146.1
RefSeq:XM_008770273.2
Other Identifiers
10777711
1371489_at
1387458_at
1388089_a_at
17695453
29274
5625089
5802894
5844110
5872385
6066492
6071993
6192087
6194901
6211906
6352033
6398735
6488062
6538014
AF022081_at
A_44_P145549
A_44_P480240
A_64_P020601
GE20570
GO:0003824
GO:0005634
GO:0005654
GO:0005737
GO:0005856
GO:0006351
GO:0006355
GO:0007010
GO:0007059
GO:0008270
GO:0016604
GO:0016605
GO:0016740
GO:0030163
GO:0032184
GO:0042802
GO:0043161
GO:0043226
GO:0045944
GO:0046685
GO:0061630
GO:0065003
GO:0090169
GO:0090234
GO:0120186
GO:0140096
GO:1990752
ILMN_1369383
ILMN_2039579
PH_rn_0012422
rc_AI102753_at
Participates
as a candidate of
E3 ligases in proteasomal degradation [cytosol] (Rattus norvegicus)
Inferred From
RNF4 [cytosol]
(Homo sapiens)
Cross References
RefSeq
XP_017454635.1
,
XP_008768494.1
,
XP_008768493.1
,
XP_008768495.1
,
NP_062055.1
,
XP_017454634.1
ENSEMBL
ENSRNOP00000096496
,
ENSRNOT00000095762
IntEnz
2.3.2.27
PRO
O88846
RGD
3583
PDB
5AIU
,
3NG2
,
4AP4
,
5AIT
Interactors (4)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P51668 UBE2D1
3
UBE2D1 [cytosol]
(R-HSA-174236)
UBE2D1 [nucleoplasm]
(R-HSA-174197)
Ub-C85-UBE2D1 [cytosol]
(R-HSA-8864160)
0.544
4
UniProt:P61956 SUMO2
6
lysyl-G93-SUMOyl-K11-SUMO2 [nucleoplasm]
(R-HSA-9761546)
UBE2I-G93-SUMO2 [nucleoplasm]
(R-HSA-3730625)
SUMO2 [nucleoplasm]
(R-HSA-2984281)
lysyl-G93-SUMO2 [cytosol]
(R-HSA-9834803)
UBA2-G93-SUMO2 [nucleoplasm]
(R-HSA-3730618)
SUMO2(1-95) [nucleoplasm]
(R-HSA-2990837)
0.544
2
UniProt:Q13569 TDG
3
TDG [nucleoplasm]
(R-HSA-65812)
monoSUMO1-K330-TDG [nucleoplasm]
(R-HSA-4551718)
polySUMO2,3-K330-TDG [nucleoplasm]
(R-HSA-4551628)
0.499
2
UniProt:P27695 APEX1
1
APEX1 [nucleoplasm]
(R-HSA-50119)
0.499
2
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