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Smg6 [cytosol]
Stable Identifier
R-RNO-927851
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
cytosol
Synonyms
SMG6, D4A589
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Rattus norvegicus)
Nonsense-Mediated Decay (NMD) (Rattus norvegicus)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Rattus norvegicus)
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Rattus norvegicus)
Smg6 [cytosol] (Rattus norvegicus)
mRNA Cleaved by SMG6 [cytosol] (Rattus norvegicus)
Smg6 [cytosol] (Rattus norvegicus)
SMG6 hydrolyzes mRNA with premature termination codon (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Smg6 [cytosol] (Rattus norvegicus)
Smg6 [cytosol] (Rattus norvegicus)
mRNA Cleaved by SMG6 [cytosol] (Rattus norvegicus)
Smg6 [cytosol] (Rattus norvegicus)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Smg6 [cytosol] (Rattus norvegicus)
Smg6 [cytosol] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:D4A589
Gene Names
Smg6
Reference Genes
BioGPS Gene:287522 Smg6
ENSEMBL:ENSRNOG00000003041
ENSEMBL:ENSRNOG00000062142
Monarch:287522 Smg6
NCBI Gene:287522 Smg6
UCSC:D4A589 Smg6
Reference Transcript
RefSeq:NM_001105808.1 Smg6
Other Identifiers
10735843
1374639_at
17648464
287522
5651126
5681315
5702735
5731006
5793379
5801161
5810759
5868748
5941390
5974753
6033869
6054355
6131808
6137422
6163758
6271564
6283933
6334610
6336029
6381026
6403544
6408962
6425436
6482360
6537414
6575960
6675210
A_44_P270096
A_44_P363095
A_44_P530265
A_44_P636043
A_64_P085803
GE1169542
GE1239214
GE16798
GO:0000184
GO:0003677
GO:0003723
GO:0003824
GO:0004521
GO:0005515
GO:0005634
GO:0005730
GO:0005737
GO:0005829
GO:0016071
GO:0016787
GO:0032200
GO:0032204
GO:0035145
GO:0042162
GO:0043021
GO:0043226
GO:0070034
GO:0070182
GO:0140098
GO:1904354
ILMN_1357082
PH_rn_0006679
rc_AA800800_at
rc_AA956033_at
Participates
as an output of
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Rattus norvegicus)
as an input of
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Rattus norvegicus)
as a component of
mRNA Cleaved by SMG6 [cytosol] (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Inferred From
SMG6 [cytosol]
(Homo sapiens)
Cross References
ENSEMBL
ENSRNOT00000004058
,
ENSRNOP00000004058
RGD
1595918
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