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PHF5A [nucleoplasm]
Stable Identifier
R-RNO-66652
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
P83871
Locations in the PathwayBrowser
Expand all
Chromatin organization (Rattus norvegicus)
ATP-dependent chromatin remodelers (Rattus norvegicus)
CHD chromatin remodelers (Rattus norvegicus)
CHD1 and CHD2 subfamily (Rattus norvegicus)
CHD1:H3K4me3 interacts with post-initiation transcription complexes (Rattus norvegicus)
CHD1:H3K4 nucleosome:FACT complex:U2 snRNP complex:PAF1C complex [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Metabolism of RNA (Rattus norvegicus)
Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
mRNA 3'-end processing (Rattus norvegicus)
mRNA Polyadenylation (Rattus norvegicus)
CPA complex components dissociate from polyadenylated pre-mRNA (distal 3'UTR PAS) (Rattus norvegicus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
CPA complex components dissociate from polyadenylated pre-mRNA (intronic PAS) (Rattus norvegicus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
CPA complex components dissociate from polyadenylated pre-mRNA (proximal 3'UTR PAS) (Rattus norvegicus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Core CPA complex binds capped pre-mRNA (Rattus norvegicus)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Rattus norvegicus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
PP1 dephosphorylates RNA Pol II (Rattus norvegicus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
RBBP6 activates CPSF complex (Rattus norvegicus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Recruitment of other CPA components to pre-mRNA-bound CPA core (Rattus norvegicus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Rattus norvegicus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
mRNA Splicing (Rattus norvegicus)
mRNA Splicing - Major Pathway (Rattus norvegicus)
Formation of the Spliceosomal B* complex (Rattus norvegicus)
Spliceosomal B* complex [nucleoplasm] (Rattus norvegicus)
U2 12S snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Spliceosomal Bact complex [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal C complex containing intron lariat (Rattus norvegicus)
Spliceosomal B* complex [nucleoplasm] (Rattus norvegicus)
U2 12S snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
U2 12S snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal C* complex (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
U2 12S snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
U2 12S snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal P complex and exon ligation (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
U2 12S snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Spliceosomal P complex [nucleoplasm] (Rattus norvegicus)
U2 12S snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Rattus norvegicus)
Intron Lariat Spliceosome (ILS) [nucleoplasm] (Rattus norvegicus)
U2 12S snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
Spliceosomal P complex [nucleoplasm] (Rattus norvegicus)
U2 12S snRNP [nucleoplasm] (Rattus norvegicus)
PHF5A [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:P83871
Reference Genes
BioGPS Gene:192246
ENSEMBL:ENSRNOG00000024170
ENSEMBL:ENSRNOG00055028438
ENSEMBL:ENSRNOG00060030905
ENSEMBL:ENSRNOG00065028872
KEGG:rno:192246
Monarch:192246
NCBI Gene:192246
UCSC:P83871
Reference Transcript
RefSeq:NM_138888.2
Participates
as a component of
U2 snRNP [nucleoplasm] (Rattus norvegicus)
U2 12S snRNP [nucleoplasm] (Rattus norvegicus)
Inferred From
PHF5A [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_620243.1
PRO
P83871
RGD
621555
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