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Bgn [lysosomal lumen]
Stable Identifier
R-RNO-2065070
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
lysosomal lumen
Synonyms
C4S-BGN, P47853
Locations in the PathwayBrowser
Expand all
Metabolism (Rattus norvegicus)
Metabolism of carbohydrates (Rattus norvegicus)
Glycosaminoglycan metabolism (Rattus norvegicus)
Chondroitin sulfate/dermatan sulfate metabolism (Rattus norvegicus)
CS/DS degradation (Rattus norvegicus)
DSPG and CSPG translocate to the lysosome for degradation (Rattus norvegicus)
CSPGs [lysosomal lumen] (Rattus norvegicus)
C4S-PG [lysosomal lumen] (Rattus norvegicus)
Bgn [lysosomal lumen] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:P47853
Gene Names
Bgn
Reference Genes
BioGPS Gene:25181 Bgn
ENSEMBL:ENSRNOG00000055962
ENSEMBL:ENSRNOG00000055962.2 Bgn
KEGG Gene (Rattus norvegicus):25181 Bgn
Monarch:25181 Bgn
NCBI Gene:25181 Bgn
Reference Transcript
RefSeq:NM_017087.1 Bgn
Other Identifiers
10935890
1367594_at
17875011
25181
5650485
5722003
5905475
5961883
6026275
6063747
6093093
6108935
6155125
6359453
6492906
6646662
6740089
A_43_P11812
A_64_P059895
GE20331
GO:0005515
ILMN_2040208
PH_rn_0015925
PH_rn_0021855
U17834_at
rc_AA859830_s_at
Participates
as a member of
C4S-PG [lysosomal lumen] (Rattus norvegicus)
Other forms of this molecule
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [lysosomal lumen]
Bgn [lysosomal lumen]
Bgn [lysosomal lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [Golgi lumen]
Bgn [extracellular region]
Bgn [extracellular region]
Bgn [extracellular region]
Bgn [lysosomal lumen]
Bgn [lysosomal lumen]
Bgn [extracellular region]
Bgn [extracellular region]
Bgn [extracellular region]
Bgn [lysosomal lumen]
Inferred From
C4S-BGN [lysosomal lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63513) at unknown position
Modification
beta-D-GalNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-GalNAc4S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_058783.1
Ensembl
ENSRNOT00000119907
,
ENSRNOG00000055962
,
ENSRNOP00000078269
PRO
P47853
RGD
2207
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