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Alyref [nucleoplasm]
Stable Identifier
R-RNO-156649
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
ALYREF, M0RBB1
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Rattus norvegicus)
Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
Transport of Mature Transcript to Cytoplasm (Rattus norvegicus)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Rattus norvegicus)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Rattus norvegicus)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
TREX (minus DDX39B) [nucleoplasm] (Rattus norvegicus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the export-competent mRNP complex through the NPC (Rattus norvegicus)
NPC:NXF1,2:NXT1:EJC:CBC:mRNA [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of Mature mRNAs Derived from Intronless Transcripts (Rattus norvegicus)
Transport of Mature mRNA Derived from an Intronless Transcript (Rattus norvegicus)
Docking of the Mature intronless derived transcript derived mRNA, TAP and Aly/Ref at the NPC (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the Mature intronless transcript derived mRNA:TAP:Aly/Ref Complex through the NPC (Rattus norvegicus)
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the SLBP Dependant Mature mRNA (Rattus norvegicus)
Docking of Mature Replication Dependent Histone mRNA with the NPC (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the Mature IntronlessTranscript Derived Histone mRNA:SLBP:TAP:Aly/Ref complex through the NPC (Rattus norvegicus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the SLBP independent Mature mRNA (Rattus norvegicus)
Docking of Mature Histone mRNA complex:TAP at the NPC (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref Complex through the NPC (Rattus norvegicus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
mRNA Splicing (Rattus norvegicus)
mRNA Splicing - Major Pathway (Rattus norvegicus)
Formation of the Spliceosomal B* complex (Rattus norvegicus)
Spliceosomal B* complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Spliceosomal Bact complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal C complex containing intron lariat (Rattus norvegicus)
Spliceosomal B* complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal C* complex (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal P complex and exon ligation (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Spliceosomal P complex [nucleoplasm] (Rattus norvegicus)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Rattus norvegicus)
Spliceosomal P complex [nucleoplasm] (Rattus norvegicus)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:M0RBB1
Gene Names
Alyref
Reference Genes
BioGPS Gene:690585 Alyref
ENSEMBL:ENSRNOG00000036687
KEGG:rno:690585 Alyref
Monarch:690585 Alyref
NCBI Gene:690585 Alyref
UCSC:M0RBB1 Alyref
Reference Transcript
RefSeq:NM_001394394.1 Alyref
Other Identifiers
10749681
1374897_at
17664022
5870245
5946693
5984714
6219160
6381249
6656226
6707123
690585
A_44_P267809
A_64_P151368
A_64_P152627
GO:0003676
GO:0003723
GO:0016607
PH_rn_0007945
Participates
as an input of
Docking of the Mature intronless derived transcript derived mRNA, TAP and Aly/Ref at the NPC (Rattus norvegicus)
Docking of Mature Replication Dependent Histone mRNA with the NPC (Rattus norvegicus)
Docking of Mature Histone mRNA complex:TAP at the NPC (Rattus norvegicus)
as a component of
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal Pre-B complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal B complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal Bact complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal B* complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
as a member of
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Other forms of this molecule
Alyref [cytosol]
Inferred From
ALYREF [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001381323.1
ENSEMBL
ENSRNOT00000071823
,
ENSRNOG00000036687
,
ENSRNOP00000066841
RGD
1594679
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