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Prpf40a [nucleoplasm]
Stable Identifier
R-MMU-8867890
Type
Protein [EntityWithAccessionedSequence]
Species
Mus musculus
Compartment
nucleoplasm
Synonyms
PRPF40A, Q9R1C7
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Mus musculus)
Processing of Capped Intron-Containing Pre-mRNA (Mus musculus)
mRNA 3'-end processing (Mus musculus)
mRNA Polyadenylation (Mus musculus)
CPA complex components dissociate from polyadenylated pre-mRNA (distal 3'UTR PAS) (Mus musculus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
CPA complex components dissociate from polyadenylated pre-mRNA (intronic PAS) (Mus musculus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
CPA complex components dissociate from polyadenylated pre-mRNA (proximal 3'UTR PAS) (Mus musculus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Core CPA complex binds capped pre-mRNA (Mus musculus)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
PP1 dephosphorylates RNA Pol II (Mus musculus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
RBBP6 activates CPSF complex (Mus musculus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Recruitment of other CPA components to pre-mRNA-bound CPA core (Mus musculus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
mRNA Splicing (Mus musculus)
mRNA Splicing - Major Pathway (Mus musculus)
Formation of the Spliceosomal B complex (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Spliceosomal Pre-B complex [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Formation of the Spliceosomal E complex (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
Spliceosomal E complex [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Mus musculus)
External Reference Information
External Reference
UniProt:Q9R1C7
Gene Names
Prpf40a
Reference Genes
BioGPS Gene:56194 Prpf40a
ENSEMBL:ENSMUSG00000061136
KEGG:mmu:56194 Prpf40a
Monarch:56194 Prpf40a
NCBI Gene:56194 Prpf40a
UCSC:Q9R1C7 Prpf40a
Other Identifiers
10482731
111135_at
113028_at
115784_at
128963_at
1420916_at
1420917_at
1429436_at
1429437_at
1442171_at
1450035_a_at
164021_at
17385329
4416821
4423946
4449797
4462380
4468927
4469390
4478719
4482065
4496169
4537441
4564411
4611134
4688527
4712883
4740879
4767919
4776333
4787558
4787989
4821652
4832389
4837018
4864697
4885615
5006269
5045236
5053591
5064391
5090193
5093945
5107042
5123715
5133815
5199662
5270723
5296589
5342339
5372331
5384324
5409009
5495586
5512272
5588995
5594531
56194
A_51_P193446
A_52_P47450
A_55_P2719594
GE37246
GO:0000398
GO:0003723
GO:0005515
GO:0005634
GO:0005685
GO:0006397
GO:0007010
GO:0008360
GO:0008380
GO:0016071
GO:0016363
GO:0016477
GO:0016607
GO:0032465
GO:0045292
GO:0048870
GO:0070064
GO:0071004
ILMN_1236511
ILMN_1248359
ILMN_1250117
ILMN_2562567
ILMN_2642806
ILMN_2760043
mMC006977
mMC007782
mMC013930
mMR030109
Participates
as a component of
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal E complex [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal Pre-B complex [nucleoplasm] (Mus musculus)
as an output of
Formation of the Spliceosomal B complex (Mus musculus)
as an input of
Formation of the Spliceosomal E complex (Mus musculus)
Inferred From
PRPF40A [nucleoplasm]
(Homo sapiens)
Cross References
ENSEMBL
ENSMUST00000239398
,
ENSMUSP00000159339
,
ENSMUSG00000061136
PRO
Q9R1C7
GlyGen
Q9R1C7
MGI
1860512
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9ULX6 AKAP8L
1
AKAP8L [nucleoplasm]
(R-HSA-9821364)
0.508
3
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