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PRPF40A [nucleoplasm]
Stable Identifier
R-HSA-8867890
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Pre-mRNA-processing factor 40 homolog A, PR40A_HUMAN, FBP11
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal A complex (update) (Homo sapiens)
Spliceosomal A complex [nucleoplasm] (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Spliceosomal E complex [nucleoplasm] (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal B complex (new) (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal E complex (update) (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Spliceosomal E complex [nucleoplasm] (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal Pre-B complex (new) (Homo sapiens)
Spliceosomal A complex [nucleoplasm] (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:O75400 PRPF40A
Gene Names
PRPF40A, FBP11, FLAF1, FNBP3, HIP10, HYPA, HSPC225
Chain
chain:1-957
Reference Genes
BioGPS Gene:55660 PRPF40A
COSMIC (genes):PRPF40A PRPF40A
CTD Gene:55660 PRPF40A
dbSNP Gene:55660 PRPF40A
ENSEMBL:ENSG00000196504.20 PRPF40A
HGNC:16463 PRPF40A
KEGG Gene (Homo sapiens):55660 PRPF40A
Monarch:55660 PRPF40A
NCBI Gene:55660 PRPF40A
OMIM:612941 PRPF40A
UCSC:O75400 PRPF40A
Reference Transcript
RefSeq:NM_017892.3 PRPF40A
Other Identifiers
11743385_a_at
213729_PM_at
213729_at
214941_PM_s_at
214941_s_at
2581579
2581580
2581581
2581582
2581583
2581585
2581586
2581587
2581588
2581589
2581590
2581593
2581595
2581598
2581603
2581605
2581606
37506_at
37507_i_at
55660
GE85206
GO:0000398
GO:0000910
GO:0003723
GO:0005515
GO:0005622
GO:0005634
GO:0005654
GO:0005685
GO:0006397
GO:0007010
GO:0007049
GO:0008360
GO:0008380
GO:0016020
GO:0016071
GO:0016363
GO:0016477
GO:0016607
GO:0032465
GO:0032991
GO:0043226
GO:0045292
GO:0048856
GO:0048870
GO:0051301
GO:0071004
Hs.119325.0.S1_3p_at
Hs.119325.1.S1_3p_a_at
ILMN_1659854
TC02004643.hg
TC02004644.hg
Participates
as an output of
Formation of the Spliceosomal B complex (new) (Homo sapiens)
as an input of
Formation of the Spliceosomal E complex (update) (Homo sapiens)
as a component of
Spliceosomal E complex [nucleoplasm] (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
Spliceosomal A complex [nucleoplasm] (Homo sapiens)
Inferred To
prp40 [nucleoplasm]
(Schizosaccharomyces pombe)
prpf40a [nucleoplasm]
(Xenopus tropicalis)
PRPF40A [nucleoplasm]
(Bos taurus)
PRPF40A [nucleoplasm]
(Caenorhabditis elegans)
PRPF40A [nucleoplasm]
(Canis familiaris)
PRPF40A [nucleoplasm]
(Danio rerio)
PRPF40A [nucleoplasm]
(Dictyostelium discoideum)
PRPF40A [nucleoplasm]
(Gallus gallus)
PRPF40A [nucleoplasm]
(Plasmodium falciparum)
PRPF40A [nucleoplasm]
(Sus scrofa)
Prp40 [nucleoplasm]
(Drosophila melanogaster)
Prpf40a [nucleoplasm]
(Mus musculus)
Prpf40a [nucleoplasm]
(Rattus norvegicus)
Cross References
RefSeq
NP_060362.3
OpenTargets
ENSG00000196504
GeneCards
O75400
HPA
ENSG00000196504-PRPF40A
Ensembl
ENSG00000196504
,
ENST00000354363
,
ENSP00000346332
PRO
O75400
Pharos - Targets
O75400
PDB
2DYF
,
2KZG
,
1UZC
,
1YWI
,
1ZR7
,
2LKS
,
2L5F
,
2CQN
,
2L9V
,
1YWJ
Interactors (9)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P42858 HTT
1
HTT [nucleoplasm]
(R-HSA-9023590)
0.743
15
UniProt:Q9BUJ2 HNRNPUL1
1
HNRNPUL1 [nucleoplasm]
(R-HSA-72106)
0.553
2
UniProt:Q9NRR5 UBQL4
0.553
2
UniProt:Q9H190 SDCB2
0.553
2
UniProt:Q53F19 NCBP3
0.527
2
UniProt:Q15459 SF3A1
1
SF3A1 [nucleoplasm]
(R-HSA-71962)
0.508
2
UniProt:Q12873 CHD3
2
CHD3 [nucleoplasm]
(R-HSA-4657012)
monoSUMO1-K1971-CHD3 [nucleoplasm]
(R-HSA-8956372)
0.508
2
UniProt:Q8N5F7 NKAP
1
NKAP [nucleoplasm]
(R-HSA-9769602)
0.508
2
UniProt:Q15637 SF1
1
SF1 [nucleoplasm]
(R-HSA-8865928)
0.482
3
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