3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen]

Stable Identifier
R-HSA-2173240
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
endoplasmic reticulum lumen
Synonyms
3,4-Hyp 5-Gal-Hyl-collagen alpha-1(XIII) chain, 3,4-hydroxyprolyl-collagen alpha-1(XIII) chain, COL13A1, CODA1_HUMAN
Locations in the PathwayBrowser
Expand all
External Reference Information
External Reference
UniProt:Q5TAT6 COL13A1
Gene Names
COL13A1
Chain
chain:1-717
Reference Genes
BioGPS Gene:1305 COL13A1
COSMIC (genes):COL13A1 COL13A1
CTD Gene:1305 COL13A1
dbSNP Gene:1305 COL13A1
ENSEMBL:ENSG00000197467 COL13A1
HGNC:2190 COL13A1
KEGG:hsa:1305 COL13A1
Monarch:1305 COL13A1
NCBI Gene:1305 COL13A1
OMIM:120350 COL13A1
UCSC:Q5TAT6 COL13A1
Reference Transcript
Other Identifiers
11730533_a_at
11730534_x_at
11742450_a_at
11750544_a_at
1305
16705661
208535_PM_x_at
208535_x_at
211343_PM_s_at
211343_s_at
211809_PM_x_at
211809_x_at
3250487
3250488
3250489
3250500
3250501
3250512
3250518
3250519
3250520
3250521
3250522
3250523
3250524
3250532
3250534
3250535
3250538
3250539
3250540
3250544
3250545
3250547
3250548
3250551
3250552
3250555
3250559
3250560
3250561
3250562
3250564
3250565
3250567
3250568
3250569
3250570
3250571
3250572
3250573
3250574
3250575
3250576
3250577
3250579
3250580
3250581
3250582
3250586
3250587
3250588
3250589
3250590
3250591
3250592
3250593
3250594
3250595
3250596
38951_at
38952_s_at
50510_at
7928069
A_14_P103145
A_14_P137897
A_23_P1331
A_24_P90005
GE88279
GO:0001501
GO:0001503
GO:0001763
GO:0001958
GO:0005198
GO:0005515
GO:0005576
GO:0005581
GO:0005594
GO:0005600
GO:0005604
GO:0005615
GO:0005788
GO:0005886
GO:0005911
GO:0007155
GO:0007160
GO:0008201
GO:0030020
GO:0030154
GO:0030312
GO:0031012
GO:0045202
GO:0045211
GO:0048856
GO:0062023
GO:0098609
HMNXSV003033959
ILMN_2311052
ILMN_2370624
M33653_at
PH_hs_0012290
TC10000424.hg
g178319_3p_a_at
g178319_3p_x_at
g180828_3p_a_at
g4885144_3p_x_at
Participates
as a candidate of
as a member of
Other forms of this molecule
GlcGalHyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen]
GalHyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen]
COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GalHyl-COL13A1 [plasma membrane]
GlcGalHyl-COL13A1 [plasma membrane]
3x4Hyp-GalHyl-COL13A1 [plasma membrane]
3x4Hyp-GlcGalHyl-COL13A1 [plasma membrane]
5Hyl-COL13A1 [plasma membrane]
3x4Hyp-5Hyl-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-5Hyl-COL13A1 [plasma membrane]
COL13A1 [plasma membrane]
3x4Hyp-COL13A1 [plasma membrane]
GalHyl-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-GalHyl-COL13A1(1-?) [plasma membrane]
5Hyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-3Hyp-GlcGalHyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-5Hyl-COL13A1(1-?) [plasma membrane]
GlcGalHyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-GalHyl-COL13A1(1-?) [plasma membrane]
GalHyl-COL13A1(1-?) [plasma membrane]
COL13A1(1-?) [plasma membrane]
3x4Hyp-COL13A1(1-?) [plasma membrane]
3x4Hyp-3Hyp-COL13A1(1-?) [plasma membrane]
3x4Hyp-3Hyp-5Hyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-GlcGalHyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-3Hyp-GalHyl-COL13A1(?-717) [extracellular region]
GalHyl-COL13A1(?-717) [extracellular region]
5Hyl-COL13A1(?-717) [extracellular region]
COL13A1(?-717) [extracellular region]
3x4Hyp-GalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL13A1(?-717) [extracellular region]
GlcGalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-GlcGalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-5Hyl-COL13A1(?-717) [extracellular region]
5Hyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL13A1 [endoplasmic reticulum lumen]
Inferred To
Col13a1 [endoplasmic reticulum lumen] (Mus musculus)
Col13a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
col27a1 [endoplasmic reticulum lumen] (Xenopus tropicalis)
COL13A1 [endoplasmic reticulum lumen] (Bos taurus)
COL13A1 [endoplasmic reticulum lumen] (Canis familiaris)
COL13A1 [endoplasmic reticulum lumen] (Sus scrofa)
col27a1b [endoplasmic reticulum lumen] (Danio rerio)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,3S)-3-hydroxyproline at unknown position
PsiMod Name
(2S,3S)-3-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.
Name
O5-galactosyl-L-hydroxylysine at unknown position
PsiMod Name
O5-galactosyl-L-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.
Cross References
RefSeq
OpenTargets
ENSEMBL
GeneCards
HPA
PRO
Pharos - Targets
Orphanet
HMDB Protein
Interactors (1)
Accession #Entities Entities Confidence Score Evidence (IntAct)
 UniProt:Q6ISS4 LAIR2  1 0.527 3
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