3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen]

Stable Identifier
R-HSA-2173240
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
endoplasmic reticulum lumen
Synonyms
3,4-Hyp 5-Gal-Hyl-collagen alpha-1(XIII) chain, 3,4-hydroxyprolyl-collagen alpha-1(XIII) chain, COL13A1, CODA1_HUMAN
Locations in the PathwayBrowser
Expand all
External Reference Information
External Reference
UniProt:Q5TAT6 COL13A1
Gene Names
COL13A1
Chain
chain:1-717
Reference Genes
BioGPS Gene:1305 COL13A1
COSMIC (genes):COL13A1 COL13A1
CTD Gene:1305 COL13A1
dbSNP Gene:1305 COL13A1
ENSEMBL:ENSG00000197467 COL13A1
HGNC:2190 COL13A1
KEGG Gene (Homo sapiens):1305 COL13A1
Monarch:1305 COL13A1
NCBI Gene:1305 COL13A1
OMIM:120350 COL13A1
UCSC:Q5TAT6 COL13A1
Reference Transcript
Other Identifiers
0000580152
11730533_a_at
11730534_x_at
11742450_a_at
11750544_a_at
1305
16705661
211343_s_at
211809_x_at
3250487
3250488
3250489
3250501
3250518
3250520
3250524
3250535
3250538
3250540
3250544
3250545
3250548
3250551
3250552
3250555
3250559
3250560
3250562
3250564
3250565
3250567
3250569
3250570
3250571
3250572
3250574
3250575
3250576
3250577
3250579
3250581
3250582
3250586
3250591
3250594
3250595
3250596
38951_at
38952_s_at
50392
7928069
A0A2R8YGI3
A_14_P137897
A_23_P1331
A_24_P90005
AAA51685
AAA51987
AAA51988
AAA51989
AAA51990
AAA51991
AAA52047
AAA52048
AAI36386
AC024601
AC025426
AJ293624
AL138925
BC136385
CAC00688
CCDS44419
CCDS44423
CCDS44424
CCDS44425
CCDS44427
CCDS44428
COL13A1
COL13A1-201
COL13A1-202
COL13A1-205
COL13A1-210
COL13A1-212
COL13A1-213
COL13A1-214
E7ES50
E7EX21
ENSG00000197467
ENSP00000346553
ENSP00000350463
ENSP00000381949
ENSP00000428057
ENSP00000428342
ENSP00000430061
ENSP00000430173
ENST00000354547
ENST00000354547.7
ENST00000357811
ENST00000357811.7
ENST00000398978
ENST00000398978.7
ENST00000517713
ENST00000517713.5
ENST00000520133
ENST00000520133.5
ENST00000520267
ENST00000520267.5
ENST00000522165
ENST00000522165.5
EntrezGene:1305
EntrezGene:COL13A1
g178319_3p_a_at
g178319_3p_x_at
g180828_3p_a_at
g4885144_3p_x_at
GE88279
GO:0001503
GO:0001763
GO:0001958
GO:0003674
GO:0005198
GO:0005201
GO:0005515
GO:0005575
GO:0005576
GO:0005581
GO:0005600
GO:0005615
GO:0005622
GO:0005623
GO:0005737
GO:0005783
GO:0005788
GO:0005886
GO:0005911
GO:0007155
GO:0007160
GO:0007275
GO:0008150
GO:0008201
GO:0009056
GO:0016020
GO:0016021
GO:0030020
GO:0030054
GO:0030154
GO:0030198
GO:0030574
GO:0031012
GO:0032991
GO:0043167
GO:0043226
GO:0045202
GO:0045211
GO:0048856
GO:0062023
GO:0098609
HGNC:2190
HPA050392
ILMN_2311052
ILMN_2370624
IPR008160
M15524
M20795
M20796
M20797
M20798
M20799
M20800
M20801
M20802
M20803
M20804
M20805
M33653
M33653_at
M59217
MIM:120350
MIM:616720
NM_001130103
NM_001320951
NM_001368884
NM_001368885
NM_001368895
NM_001368896
NM_001368897
NM_001368898
NM_080798
NM_080800
NM_080801
NM_080802
NM_080805
NP_001123575
NP_001307880
NP_001355813
NP_001355814
NP_001355824
NP_001355825
NP_001355826
NP_001355827
NP_542988
NP_542990
NP_542991
NP_542992
NP_542995
PF01391
PH_hs_0012290
TC10000424.hg
UPI000046FD72
UPI000046FD74
UPI0000EE047D
UPI0000F6E6D3
UPI0000F6E6D7
UPI000192C3E9
UPI0001CA7E68
XM_017015684
XM_017015691
XM_017015695
XM_024447816
XP_016871173
XP_016871180
XP_016871184
XP_024303584
Participant Of
hasCandidate
hasMember
Other forms of this molecule
GlcGalHyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen]
GalHyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen]
COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL13A1 [endoplasmic reticulum lumen]
5Hyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL13A1(?-717) [extracellular region]
3x4Hyp-GlcGalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL13A1(?-717) [extracellular region]
GlcGalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-COL13A1(?-717) [extracellular region]
3x4Hyp-COL13A1(?-717) [extracellular region]
3x4Hyp-GalHyl-COL13A1(?-717) [extracellular region]
COL13A1(?-717) [extracellular region]
5Hyl-COL13A1(?-717) [extracellular region]
GalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-GlcGalHyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-3Hyp-5Hyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-3Hyp-COL13A1(1-?) [plasma membrane]
3x4Hyp-COL13A1(1-?) [plasma membrane]
COL13A1(1-?) [plasma membrane]
GalHyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-GalHyl-COL13A1(1-?) [plasma membrane]
GlcGalHyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-5Hyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-3Hyp-GlcGalHyl-COL13A1(1-?) [plasma membrane]
5Hyl-COL13A1(1-?) [plasma membrane]
3x4Hyp-3Hyp-GalHyl-COL13A1 [plasma membrane]
GlcGalHyl-COL13A1 [plasma membrane]
3x4Hyp-GalHyl-COL13A1 [plasma membrane]
3x4Hyp-GlcGalHyl-COL13A1 [plasma membrane]
5Hyl-COL13A1 [plasma membrane]
3x4Hyp-5Hyl-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-5Hyl-COL13A1 [plasma membrane]
COL13A1 [plasma membrane]
3x4Hyp-COL13A1 [plasma membrane]
GalHyl-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-GalHyl-COL13A1(1-?) [plasma membrane]
Inferred To
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen] (Bos taurus)
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen] (Caenorhabditis elegans)
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen] (Canis familiaris)
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen] (Danio rerio)
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen] (Dictyostelium discoideum)
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen] (Gallus gallus)
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen] (Mus musculus)
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen] (Rattus norvegicus)
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen] (Sus scrofa)
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen] (Xenopus tropicalis)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,3S)-3-hydroxyproline at unknown position
PsiMod Name
(2S,3S)-3-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.
Name
O5-galactosyl-L-hydroxylysine at unknown position
PsiMod Name
O5-galactosyl-L-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.
Cross References
RefSeq
OpenTargets
GeneCards
PRO
Orphanet
HMDB Protein