3x4Hyp-COL12A1 [endoplasmic reticulum lumen]

Stable Identifier
R-HSA-2172921
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
endoplasmic reticulum lumen
Synonyms
4-hydroxyprolyl-collagen alpha-1(XII) chain, COL12A1, COCA1_HUMAN
Locations in the PathwayBrowser
Expand all
External Reference Information
External Reference
UniProt:Q99715 COL12A1
Gene Names
COL12A1, COL12A1L
Chain
signal peptide:1-23, chain:24-3063
Reference Genes
BioGPS Gene:1303 COL12A1
COSMIC (genes):COL12A1 COL12A1
CTD Gene:1303 COL12A1
dbSNP Gene:1303 COL12A1
ENSEMBL:ENSG00000111799 COL12A1
ENSEMBL:ENSG00000111799.22 COL12A1
HGNC:2188 COL12A1
KEGG Gene (Homo sapiens):1303 COL12A1
Monarch:1303 COL12A1
NCBI Gene:1303 COL12A1
OMIM:120320 COL12A1
UCSC:Q99715 COL12A1
Reference Transcript
Other Identifiers
11751896_a_at
11757018_a_at
11763617_a_at
1303
17020846
225664_PM_at
225664_at
231766_PM_s_at
231766_s_at
231879_PM_at
231879_at
234951_PM_s_at
234951_s_at
2961178
2961179
2961180
2961181
2961182
2961183
2961184
2961185
2961186
2961188
2961189
2961190
2961191
2961193
2961195
2961197
2961198
2961199
2961200
2961201
2961202
2961204
2961207
2961208
2961209
2961210
2961211
2961213
2961214
2961217
2961218
2961220
2961222
2961224
2961225
2961227
2961228
2961229
2961230
2961231
2961232
2961233
2961234
2961236
2961237
2961239
2961240
2961242
2961244
2961245
2961247
2961248
2961251
2961252
2961253
2961254
2961256
2961257
2961258
2961259
2961260
2961261
2961263
2961264
2961265
2961266
2961267
2961268
2961270
2961271
2961272
2961273
2961274
2961280
2961281
2961287
2961289
2961290
44730_at
55684_at
77316_at
8127563
A_23_P214168
A_24_P291814
A_33_P3231953
GE56388
GO:0005198
GO:0005515
GO:0005576
GO:0005581
GO:0005595
GO:0005615
GO:0005783
GO:0005788
GO:0007155
GO:0030020
GO:0030154
GO:0030198
GO:0030199
GO:0030312
GO:0031012
GO:0035987
GO:0043226
GO:0048856
GO:0062023
GO:0070062
GO:1903561
HMNXSV003008657
Hs.101302.0.S2_3p_s_at
Hs.101302.1.S1_3p_a_at
Hs.16869.0.A1_3p_at
Hs.311736.0.S1_3p_at
Hs.311736.0.S1_3p_x_at
ILMN_1733756
ILMN_1741695
PH_hs_0005632
TC06001879.hg
Participates
as a member of
as a candidate of
Other forms of this molecule
3x4Hyp-3Hyp-GlcGalHyl-COL12A1 [endoplasmic reticulum lumen]
GalHyl-COL12A1 [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL12A1 [endoplasmic reticulum lumen]
3x4Hyp-GlcGalHyl-COL12A1 [endoplasmic reticulum lumen]
GlcGalHyl-COL12A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GalHyl-COL12A1 [endoplasmic reticulum lumen]
COL12A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL12A1 [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL12A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL12A1 [endoplasmic reticulum lumen]
5Hyl-COL12A1 [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL12A1(?-3063) [extracellular region]
3x4Hyp-COL12A1(?-3063) [extracellular region]
COL12A1(24-?) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL12A1(24-?) [extracellular region]
5Hyl-COL12A1(?-3063) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL12A1(?-3063) [extracellular region]
3x4Hyp-GlcGalHyl-COL12A1(24-?) [extracellular region]
GlcGalHyl-COL12A1(24-?) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL12A1(24-?) [extracellular region]
GlcGalHyl-COL12A1(?-3063) [extracellular region]
3x4Hyp-COL12A1(24-?) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL12A1(?-3063) [extracellular region]
5Hyl-COL12A1(24-?) [extracellular region]
GalHyl-COL12A1(24-?) [extracellular region]
COL12A1(?-3063) [extracellular region]
3x4Hyp-5Hyl-COL12A1(?-3063) [extracellular region]
3x4Hyp-GalHyl-COL12A1(24-?) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL12A1(?-3063) [extracellular region]
3x4Hyp-3Hyp-COL12A1(?-3063) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL12A1(24-?) [extracellular region]
GalHyl-COL12A1(?-3063) [extracellular region]
3x4Hyp-GlcGalHyl-COL12A1(?-3063) [extracellular region]
3x4Hyp-5Hyl-COL12A1(24-?) [extracellular region]
3x4Hyp-GlcGalHyl-COL12A1 [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL12A1 [extracellular region]
GlcGalHyl-COL12A1 [extracellular region]
5Hyl-COL12A1 [extracellular region]
3x4Hyp-GalHyl-COL12A1 [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL12A1 [extracellular region]
COL12A1 [extracellular region]
3x4Hyp-3Hyp-COL12A1 [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL12A1 [extracellular region]
GalHyl-COL12A1 [extracellular region]
3x4Hyp-5Hyl-COL12A1 [extracellular region]
3x4Hyp-COL12A1 [extracellular region]
3x4Hyp-3Hyp-COL12A1(24-?) [extracellular region]
Inferred To
col12a1 [endoplasmic reticulum lumen] (Xenopus tropicalis)
COL12A1 [endoplasmic reticulum lumen] (Bos taurus)
COL12A1 [endoplasmic reticulum lumen] (Gallus gallus)
COL12A1 [endoplasmic reticulum lumen] (Sus scrofa)
3x4Hyp-COL12A1 [endoplasmic reticulum lumen] (Caenorhabditis elegans)
3x4Hyp-COL12A1 [endoplasmic reticulum lumen] (Canis familiaris)
3x4Hyp-COL12A1 [endoplasmic reticulum lumen] (Danio rerio)
3x4Hyp-COL12A1 [endoplasmic reticulum lumen] (Dictyostelium discoideum)
Col12a1 [endoplasmic reticulum lumen] (Mus musculus)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Cross References
RefSeq
OpenTargets
HPA
GeneCards
Ensembl
PRO
Pharos - Targets
Orphanet
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