Reactome | SF3B3 [nucleoplasm]

SF3B3 [nucleoplasm]

Stable Identifier

R-GGA-71973

Type

Protein [EntityWithAccessionedSequence]

Species

Gallus gallus

Compartment

nucleoplasm

Synonyms

SF3B3, A0A1D6UPS9

Locations in the PathwayBrowser

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Metabolism of RNA (Gallus gallus)

- Processing of Capped Intron-Containing Pre-mRNA (Gallus gallus)
  - mRNA 3'-end processing (Gallus gallus)
    - mRNA Polyadenylation (Gallus gallus)
      - Core CPA complex binds capped pre-mRNA (Gallus gallus)
        
        Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Gallus gallus)
        
        Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Gallus gallus)
        
        U2 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
        
        Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Gallus gallus)
        
        U2 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
      - PP1 dephosphorylates RNA Pol II (Gallus gallus)
        
        CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Gallus gallus)
        
        Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Gallus gallus)
        
        U2 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
        
        CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Gallus gallus)
        
        Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Gallus gallus)
        
        U2 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
      - RBBP6 activates CPSF complex (Gallus gallus)
        
        CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Gallus gallus)
        
        Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Gallus gallus)
        
        U2 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
        
        Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Gallus gallus)
        
        Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Gallus gallus)
        
        U2 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
  - mRNA Splicing (Gallus gallus)
    - mRNA Splicing - Minor Pathway (Gallus gallus)
      - ATAC spliceosome mediated 3' splice site cleavage, exon ligation (Gallus gallus)
        
        ATAC C Complex [nucleoplasm] (Gallus gallus)
        
        U12 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
        
        U12 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
      - ATAC spliceosome mediated Lariat formation,5' splice site cleavage (Gallus gallus)
        
        ATAC C Complex [nucleoplasm] (Gallus gallus)
        
        U12 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
      - Formation of AT-AC B Complex (Gallus gallus)
        
        ATAC A Complex [nucleoplasm] (Gallus gallus)
        
        U12 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
        
        ATAC B Complex [nucleoplasm] (Gallus gallus)
        
        ATAC A Complex [nucleoplasm] (Gallus gallus)
        
        U12 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
      - Formation of AT-AC C complex (Gallus gallus)
        
        ATAC B Complex [nucleoplasm] (Gallus gallus)
        
        ATAC A Complex [nucleoplasm] (Gallus gallus)
        
        U12 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)
        
        ATAC C Complex [nucleoplasm] (Gallus gallus)
        
        U12 snRNP [nucleoplasm] (Gallus gallus)
        
        SF3B [nucleoplasm] (Gallus gallus)
        
        SF3B3 [nucleoplasm] (Gallus gallus)

External Reference Information

External Reference

UniProt:A0A1D6UPS9

Gene Names

SF3B3

Reference Genes

BioGPS Gene:415680 SF3B3

ENSEMBL:ENSGALG00010023190.1

KEGG:gga:415680 SF3B3

Monarch:415680 SF3B3

NCBI Gene:415680 SF3B3

UCSC:A0A1D6UPS9 SF3B3

Reference Transcript

Other Identifiers

415680

GO:0000398

GO:0003676

GO:0005515

GO:0005634

GO:0005654

GO:0005684

GO:0005689

GO:0005730

GO:0016071

GO:0042177

GO:0044877

GO:0071005

GO:0071013

GT_A_87_P036064

GT_A_87_P037155

Gga.1318.1.S1_s_at

GgaAffx.11447.1.S1_s_at

GgaAffx.13033.1.S1_at

GgaAffx.25526.2.S1_s_at

Participates

as a component of

SF3B [nucleoplasm] (Gallus gallus)

Inferred From

SF3B3 [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

XP_015134700.1, XP_001232348.2, XP_040536914.1, XP_004944176.1, XP_040536913.1, XP_040536912.1

ENSEMBL

ENSGALT00010056521, ENSGALP00010034263, ENSGALG00010023190