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ALYREF [nucleoplasm]
Stable Identifier
R-GGA-156649
Type
Protein [EntityWithAccessionedSequence]
Species
Gallus gallus
Compartment
nucleoplasm
Synonyms
ALYREF, E1C2L5
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Gallus gallus)
RNA Polymerase II Transcription (Gallus gallus)
RNA Polymerase II Transcription Termination (Gallus gallus)
Cleavage of mRNA at the 3'-end (Gallus gallus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Gallus gallus)
EJC [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
TREX (DDX39B:ATP) [nucleoplasm] (Gallus gallus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Gallus gallus)
EJC [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
TREX (DDX39B:ATP) [nucleoplasm] (Gallus gallus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Metabolism of RNA (Gallus gallus)
Processing of Capped Intron-Containing Pre-mRNA (Gallus gallus)
Transport of Mature Transcript to Cytoplasm (Gallus gallus)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Gallus gallus)
Transport of the export-competent mRNP complex through the NPC (Gallus gallus)
NPC:NXF1,2:NXT1:EJC:CBC:mRNA [nucleoplasm] (Gallus gallus)
EJC [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Transport of Mature mRNAs Derived from Intronless Transcripts (Gallus gallus)
Transport of Mature mRNA Derived from an Intronless Transcript (Gallus gallus)
Transport of the Mature intronless transcript derived mRNA:TAP:Aly/Ref Complex through the NPC (Gallus gallus)
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Transport of the SLBP Dependant Mature mRNA (Gallus gallus)
Docking of Mature Replication Dependent Histone mRNA with the NPC (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Transport of the Mature IntronlessTranscript Derived Histone mRNA:SLBP:TAP:Aly/Ref complex through the NPC (Gallus gallus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Transport of the SLBP independent Mature mRNA (Gallus gallus)
Docking of Mature Histone mRNA complex:TAP at the NPC (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Transport of the Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref Complex through the NPC (Gallus gallus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
mRNA 3'-end processing (Gallus gallus)
Cleavage of mRNA at the 3'-end (Gallus gallus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Gallus gallus)
EJC [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
TREX (DDX39B:ATP) [nucleoplasm] (Gallus gallus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Gallus gallus)
EJC [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
TREX (DDX39B:ATP) [nucleoplasm] (Gallus gallus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
mRNA Splicing (Gallus gallus)
mRNA Splicing - Major Pathway (Gallus gallus)
Formation of the Spliceosomal C complex containing intron lariat (Gallus gallus)
Spliceosomal B* complex [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
Spliceosomal C complex [nucleoplasm] (Gallus gallus)
ALYREF [nucleoplasm] (Gallus gallus)
External Reference Information
External Reference
UniProt:E1C2L5
Gene Names
ALYREF
Reference Genes
BioGPS Gene:769169 ALYREF
ENSEMBL:ENSGALG00000007237
KEGG:gga:769169 ALYREF
Monarch:769169 ALYREF
NCBI Gene:769169 ALYREF
UCSC:E1C2L5 ALYREF
Reference Transcript
RefSeq:NM_001277907.1 ALYREF
Other Identifiers
769169
GO:0003723
GO:0003729
GO:0005634
GO:0006406
GO:0006913
GO:0016607
GO:0043226
GT_A_87_P067761
GT_A_87_P119073
GT_A_87_P195678
GT_Sp_Chicken_CN223832_4210
Gga.1903.1.S1_at
Gga.1903.2.S1_at
Participates
as a component of
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Gallus gallus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Gallus gallus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Gallus gallus)
Spliceosomal Pre-B complex [nucleoplasm] (Gallus gallus)
Spliceosomal B complex [nucleoplasm] (Gallus gallus)
Spliceosomal Bact complex [nucleoplasm] (Gallus gallus)
Spliceosomal B* complex [nucleoplasm] (Gallus gallus)
Spliceosomal C complex [nucleoplasm] (Gallus gallus)
Spliceosomal C* complex [nucleoplasm] (Gallus gallus)
EJC [nucleoplasm] (Gallus gallus)
EJC [nucleoplasm] (Gallus gallus)
as an input of
Docking of Mature Replication Dependent Histone mRNA with the NPC (Gallus gallus)
Docking of Mature Histone mRNA complex:TAP at the NPC (Gallus gallus)
as a member of
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Gallus gallus)
Other forms of this molecule
ALYREF [cytosol]
Inferred From
ALYREF [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001264836.1
ENSEMBL
ENSGALT00010071002
,
ENSGALP00010043693
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