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aff4 [nucleoplasm]
Stable Identifier
R-DRE-8932788
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
AFF4, I3ISK1
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Danio rerio)
RNA Polymerase II Transcription (Danio rerio)
RNA Polymerase II Pre-transcription Events (Danio rerio)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Danio rerio)
Paused processive elongation complex [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
Abortive termination of elongation after arrest (Danio rerio)
Aborted elongation complex after arrest [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
Resumption of elongation after recovery from pausing (Danio rerio)
Paused processive elongation complex [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
TFIIS-mediated recovery of elongation from arrest (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
RNA Polymerase II Transcription Elongation (Danio rerio)
Addition of nucleotides leads to transcript elongation (Danio rerio)
Elongation complex [nucleoplasm] (Danio rerio)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
Pol II elongation complex moves on the template as transcript elongates (Danio rerio)
Elongation complex prior to separation [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
Separation of elongating transcript from template (Danio rerio)
Elongation complex prior to separation [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Danio rerio)
aff4 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:I3ISK1
Gene Names
aff4
Reference Genes
BioGPS Gene:556421 aff4
ENSEMBL:ENSDARG00000001857
Monarch:556421 aff4
NCBI Gene:556421 aff4
Reference Transcript
RefSeq:XM_005173900.3 aff4
Other Identifiers
13112275
556421
A_15_P181336
A_15_P249351
CUST_1697_PI424165564
CUST_19189_PI428451953
CUST_19190_PI428451953
CUST_19191_PI428451953
CUST_19192_PI428451953
DRER05177
DRER27818
DRER49335
DRER49722
ENSDART00000042840
ENSDART00000042840_1
ENSDART00000042840_2
GO:0005575
GO:0005622
GO:0005634
GO:0005654
GO:0008023
GO:0008150
GO:0010468
GO:0032783
GO:0032991
GO:0043226
MADDr01000033
XM_679235
Participant Of
hasComponent
Aborted elongation complex after arrest [nucleoplasm]
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm]
Elongation complex prior to separation [nucleoplasm]
Elongation complex with separated and uncleaved transcript [nucleoplasm]
Paused processive elongation complex [nucleoplasm]
Processive elongation complex [nucleoplasm]
Inferred From
AFF4 [nucleoplasm] (Homo sapiens)
Cross References
RefSeq
XP_005173957.1
Ensembl
ENSDART00000151748
,
ENSDARP00000125884
,
ENSDARG00000001857
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