Reactome | sdc2 [plasma membrane]

sdc2 [plasma membrane]

Stable Identifier

R-DRE-2076643

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

plasma membrane

Synonyms

HS(1)-SDC2, Q66I66

Locations in the PathwayBrowser

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Metabolism (Danio rerio)

- Metabolism of carbohydrates and carbohydrate derivatives (Danio rerio)
  - Glycosaminoglycan metabolism (Danio rerio)
    - Heparan sulfate/heparin (HS-GAG) metabolism (Danio rerio)
      - HS-GAG biosynthesis (Danio rerio)
        
        Some HSPGs are secreted to the plasma membrane (Danio rerio)
        
        HSPGs [plasma membrane] (Danio rerio)
        
        HS(1)-PGs [plasma membrane] (Danio rerio)
        
        sdc2 [plasma membrane] (Danio rerio)

External Reference Information

External Reference

UniProt:Q66I66

Gene Names

sdc2

Reference Genes

BioGPS Gene:282667 sdc2

ENSEMBL:ENSDARG00000002731

KEGG:dre:282667 sdc2

Monarch:282667 sdc2

NCBI Gene:282667 sdc2

UCSC:Q66I66 sdc2

Reference Transcript

RefSeq:NM_173223.2 sdc2

Participates

as a member of

Other forms of this molecule

sdc2 [plasma membrane]

sdc2 [endoplasmic reticulum lumen]

phospho-sdc2 [endoplasmic reticulum lumen]

sdc2 [Golgi lumen]

sdc2 [lysosomal lumen]

sdc2 [Golgi lumen]

phospho-sdc2 [plasma membrane]

Inferred From

Syndecan-2 [plasma membrane] (Homo sapiens)

HS(1)-SDC2 [plasma membrane] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63652) at unknown position

Modification

beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

NP_775330.2

ZFIN

ZDB-GENE-021206-3