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Heparan(4)-SDC2 [Golgi lumen]
Stable Identifier
R-DRE-2076576
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
Q90ZY9
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Heparan sulfate/heparin (HS-GAG) metabolism (Danio rerio)
HS-GAG biosynthesis (Danio rerio)
NDST1-4 N-deacetylates GlcNAc residues in heparan (Danio rerio)
Heparan(4)-PGs [Golgi lumen] (Danio rerio)
Heparan(4)-SDC2 [Golgi lumen] (Danio rerio)
NDST1-4 can sulfate a glucosamine residue in heparan to form heparan sulfate (HS) (Danio rerio)
Heparan(4)-PGs [Golgi lumen] (Danio rerio)
Heparan(4)-SDC2 [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:Q90ZY9
Reference Genes
ENSEMBL:ENSDARG00000002731
Other Identifiers
13077633
13286726
282667
A_15_P110091
A_15_P170611
A_15_P641271
BC081509.1
CJ014252
CUST_11650_PI428451958
DRER40194
Dr.12393.1.S1_at
ENSDART00000007165
ENSDART00000007165_1
ENSDART00000007165_2
ENSDART00000109002
GO:0002040
GO:0009986
GO:0016020
GO:0016021
GO:0016477
GO:0048565
GO:0048856
GO:0048870
GO:0055113
GO:0060973
GO:0070121
GO:0097435
GT_Spec_NM_173223.2_75831
LOLS00825
NM_173223
ZV700S00000665
Participates
as a member of
Heparan(4)-PGs [Golgi lumen] (Danio rerio)
Other forms of this molecule
SDC2 [plasma membrane]
phospho-p-Y179,Y191-SDC2 [plasma membrane]
SDC2 [lysosomal lumen]
HS(4)-SDC2 [plasma membrane]
HS(6)-SDC2 [plasma membrane]
HS(2)-SDC2 [plasma membrane]
HS(1)-SDC2 [plasma membrane]
HS(3)-SDC2 [plasma membrane]
HS(5)-SDC2 [plasma membrane]
SDC2 [endoplasmic reticulum lumen]
phospho-p-SDC2 [endoplasmic reticulum lumen]
XylS-SDC2 [Golgi lumen]
Gal-Xyl-SDC2 [Golgi lumen]
SDC2 [Golgi lumen]
Gal-Gal-Xyl-SDC2 [Golgi lumen]
GlcA-Gal-Gal-Xyl-SDC2 [Golgi lumen]
HS(3)-SDC2 [Golgi lumen]
HS(4)-SDC2 [Golgi lumen]
HS(2)-SDC2 [Golgi lumen]
HS(1)-SDC2 [Golgi lumen]
Heparan(3)-SDC2 [Golgi lumen]
Heparan(2)-SDC2 [Golgi lumen]
Heparan(1)-SDC2 [Golgi lumen]
Heparan-SDC2 [Golgi lumen]
HS(5)-SDC2 [Golgi lumen]
HS(6)-SDC2 [Golgi lumen]
HS(6)-SDC2 [lysosomal lumen]
Inferred From
Heparan(4)-SDC2 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63651) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcN-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
ZFIN
ZDB-GENE-021206-3
Ensembl
ENSDARP00000115190
,
ENSDARG00000002731
,
ENSDART00000141437
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