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snrpd1 [nucleoplasm]
Stable Identifier
R-DRE-192215
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
2xMe-SNRPD1, Q8JHH1
Locations in the PathwayBrowser
Expand all
Chromatin organization (Danio rerio)
ATP-dependent chromatin remodelers (Danio rerio)
CHD chromatin remodelers (Danio rerio)
CHD1 and CHD2 subfamily (Danio rerio)
CHD1:H3K4me3 interacts with post-initiation transcription complexes (Danio rerio)
CHD1:H3K4 nucleosome:FACT complex:U2 snRNP complex:PAF1C complex [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Metabolism of RNA (Danio rerio)
Metabolism of non-coding RNA (Danio rerio)
snRNP Assembly (Danio rerio)
snRNP nuclear import and release (Danio rerio)
Spliceosomal m3G capped snRNA loaded with the SM complex [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Processing of Capped Intron-Containing Pre-mRNA (Danio rerio)
mRNA 3'-end processing (Danio rerio)
mRNA Polyadenylation (Danio rerio)
Core CPA complex binds capped pre-mRNA (Danio rerio)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Danio rerio)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Danio rerio)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Danio rerio)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
PP1 dephosphorylates RNA Pol II (Danio rerio)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
RBBP6 activates CPSF complex (Danio rerio)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Danio rerio)
U1 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U2 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
mRNA Splicing (Danio rerio)
mRNA Splicing - Major Pathway (Danio rerio)
Formation of the Spliceosomal C complex containing intron lariat (Danio rerio)
Spliceosomal B* complex [nucleoplasm] (Danio rerio)
U2 12S snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP (no DDX23,PRPF6,TXNL4A) [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Spliceosomal C complex [nucleoplasm] (Danio rerio)
U2 12S snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP (no DDX23,PRPF6,TXNL4A) [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Formation of the Spliceosomal P complex and exon ligation (Danio rerio)
Spliceosomal C* complex [nucleoplasm] (Danio rerio)
U2 12S snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP (no DDX23,PRPF6,TXNL4A) [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Spliceosomal P complex [nucleoplasm] (Danio rerio)
U2 12S snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP (no DDX23,PRPF6,TXNL4A) [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
mRNA Splicing - Minor Pathway (Danio rerio)
ATAC spliceosome mediated 3' splice site cleavage, exon ligation (Danio rerio)
ATAC C Complex [nucleoplasm] (Danio rerio)
U11 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U12 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U6 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U11 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U12 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U6 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
ATAC spliceosome mediated Lariat formation,5' splice site cleavage (Danio rerio)
ATAC C Complex [nucleoplasm] (Danio rerio)
U11 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U12 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U6 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Formation of AT-AC B Complex (Danio rerio)
ATAC A Complex [nucleoplasm] (Danio rerio)
U11 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U12 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
ATAC B Complex [nucleoplasm] (Danio rerio)
ATAC A Complex [nucleoplasm] (Danio rerio)
U11 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U12 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U4 ATAC:U5:U6 ATAC Complex [nucleoplasm] (Danio rerio)
U4 ATAC snRNP:U6 ATAC snRNP [nucleoplasm] (Danio rerio)
U4 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U6 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U4 ATAC:U5:U6 ATAC Complex [nucleoplasm] (Danio rerio)
U4 ATAC snRNP:U6 ATAC snRNP [nucleoplasm] (Danio rerio)
U4 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U6 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
Formation of AT-AC C complex (Danio rerio)
ATAC B Complex [nucleoplasm] (Danio rerio)
ATAC A Complex [nucleoplasm] (Danio rerio)
U11 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U12 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U4 ATAC:U5:U6 ATAC Complex [nucleoplasm] (Danio rerio)
U4 ATAC snRNP:U6 ATAC snRNP [nucleoplasm] (Danio rerio)
U4 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U6 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
ATAC C Complex [nucleoplasm] (Danio rerio)
U11 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U12 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U5 snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U6 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
U4 ATAC snRNP [nucleoplasm] (Danio rerio)
snRNP Sm core complex [nucleoplasm] (Danio rerio)
snrpd1 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:Q8JHH1
Gene Names
snrpd1
Reference Genes
BioGPS Gene:192331 snrpd1
ENSEMBL:ENSDARG00000011648
KEGG:dre:192331 snrpd1
Monarch:192331 snrpd1
NCBI Gene:192331 snrpd1
UCSC:Q8JHH1 snrpd1
Reference Transcript
RefSeq:NM_173252.2 snrpd1
Other Identifiers
13066365
192331
A_15_P132521
DRER01587
DRER43664
Dr.10241.1.S1_at
ENSDART00000013217
ENSDART00000013217_1
ENSDART00000013217_2
ENSDART00000109545
GO:0000387
GO:0003723
GO:0006396
GT_Spec_NM_173252.2_290915
LOLS04681
MADDr01000714
ZV700S00000079
Participates
as a component of
snRNP Sm core complex [nucleoplasm] (Danio rerio)
Other forms of this molecule
snrpd1 [cytosol]
snrpd1 [cytosol]
Inferred From
2xMe-SNRPD1 [nucleoplasm]
(Homo sapiens)
Modified Residues
Name
monomethylated residue at unknown position
PsiMod Name
monomethylated residue [MOD:00599]
PsiMod Definition
A protein modification that effectively replaces one hydrogen atom with one methyl group.
Name
monomethylated residue at unknown position
PsiMod Name
monomethylated residue [MOD:00599]
PsiMod Definition
A protein modification that effectively replaces one hydrogen atom with one methyl group.
Cross References
RefSeq
NP_775359.1
ENSEMBL
ENSDARP00000027770
,
ENSDARG00000011648
,
ENSDART00000013217
ZFIN
ZDB-GENE-020419-14
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