Reactome | rbm8a [nucleoplasm]

rbm8a [nucleoplasm]

Stable Identifier

R-DRE-156659

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

nucleoplasm

Synonyms

RBM8A, Q5D018

Locations in the PathwayBrowser

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Metabolism of RNA (Danio rerio)

- Processing of Capped Intron-Containing Pre-mRNA (Danio rerio)
  - Transport of Mature Transcript to Cytoplasm (Danio rerio)
    - Transport of Mature mRNA derived from an Intron-Containing Transcript (Danio rerio)
      - NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Danio rerio)
        
        NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Danio rerio)
        
        capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Danio rerio)
        
        EJC [nucleoplasm] (Danio rerio)
        
        Core EJC [nucleoplasm] (Danio rerio)
        
        Magoh-Y14 complex [nucleoplasm] (Danio rerio)
        
        rbm8a [nucleoplasm] (Danio rerio)
        
        polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Danio rerio)
        
        EJC [nucleoplasm] (Danio rerio)
        
        Core EJC [nucleoplasm] (Danio rerio)
        
        Magoh-Y14 complex [nucleoplasm] (Danio rerio)
        
        rbm8a [nucleoplasm] (Danio rerio)
      - Transport of the export-competent mRNP complex through the NPC (Danio rerio)
        
        NPC:NXF1,2:NXT1:EJC:CBC:mRNA [nucleoplasm] (Danio rerio)
        
        EJC [nucleoplasm] (Danio rerio)
        
        Core EJC [nucleoplasm] (Danio rerio)
        
        Magoh-Y14 complex [nucleoplasm] (Danio rerio)
        
        rbm8a [nucleoplasm] (Danio rerio)
  - mRNA Splicing (Danio rerio)
    - mRNA Splicing - Major Pathway (Danio rerio)
      - Formation of the Spliceosomal C complex containing intron lariat (Danio rerio)
        
        Spliceosomal B* complex [nucleoplasm] (Danio rerio)
        
        Core EJC [nucleoplasm] (Danio rerio)
        
        Magoh-Y14 complex [nucleoplasm] (Danio rerio)
        
        rbm8a [nucleoplasm] (Danio rerio)
        
        Spliceosomal C complex [nucleoplasm] (Danio rerio)
        
        Core EJC [nucleoplasm] (Danio rerio)
        
        Magoh-Y14 complex [nucleoplasm] (Danio rerio)
        
        rbm8a [nucleoplasm] (Danio rerio)
      - Formation of the Spliceosomal P complex and exon ligation (Danio rerio)
        
        Spliceosomal C* complex [nucleoplasm] (Danio rerio)
        
        Core EJC [nucleoplasm] (Danio rerio)
        
        Magoh-Y14 complex [nucleoplasm] (Danio rerio)
        
        rbm8a [nucleoplasm] (Danio rerio)
        
        Spliceosomal P complex [nucleoplasm] (Danio rerio)
        
        spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Danio rerio)
        
        EJC [nucleoplasm] (Danio rerio)
        
        Core EJC [nucleoplasm] (Danio rerio)
        
        Magoh-Y14 complex [nucleoplasm] (Danio rerio)
        
        rbm8a [nucleoplasm] (Danio rerio)

External Reference Information

External Reference

UniProt:Q5D018

Gene Names

rbm8a

Reference Genes

BioGPS Gene:503767 rbm8a

ENSEMBL:ENSDARG00000016516

KEGG:dre:503767 rbm8a

Monarch:503767 rbm8a

NCBI Gene:503767 rbm8a

UCSC:Q5D018 rbm8a

Reference Transcript

RefSeq:NM_001013345.1 rbm8a

Other Identifiers

13034589

503767

A_15_P142491

A_15_P506952

A_15_P740361

DRER02260

Dr.4412.15.S1_at

ENSDART00000018253

ENSDART00000018253_1

ENSDART00000018253_2

GO:0003676

GO:0003723

GO:0003729

GO:0005634

GO:0005737

GO:0006396

GT_Spec_NM_001013345.1_302225

MADDr01001058

NM_001013345

TC238169

ZV700S00005315

Participates

as a component of

Magoh-Y14 complex [nucleoplasm] (Danio rerio)

Other forms of this molecule

rbm8a [cytosol]

Inferred From

RBM8A [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

NP_001013363.1

ENSEMBL

ENSDARP00000026575, ENSDARG00000016516, ENSDART00000018253

ZFIN

ZDB-GENE-050306-51

PRO

Q5D018

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