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RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm]
Stable Identifier
R-DRE-109909
Type
Complex
Species
Danio rerio
Compartment
nucleoplasm
Locations in the PathwayBrowser
Expand all
DNA Repair (Danio rerio)
Nucleotide Excision Repair (Danio rerio)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Danio rerio)
Formation of TC-NER Pre-Incision Complex (Danio rerio)
Active RNA Pol II complex transcribes lesion-containing DNA template (Danio rerio)
Damaged dsDNA with open transcription bubble:Hyperphosphorylated RNA Pol II:TFIIH [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
ERCC8 (CSA) binds stalled RNA Pol II (Danio rerio)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
ERCC8:DDB1:CUL4:RBX1 ubiquitinates ERCC6 and RNA Pol II (Danio rerio)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
RNA Pol II initiates transcription from damaged DNA template (Danio rerio)
Damaged dsDNA with open transcription bubble:Hyperphosphorylated RNA Pol II:TFIIH [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Gene expression (Transcription) (Danio rerio)
RNA Polymerase II Transcription (Danio rerio)
Generic Transcription Pathway (Danio rerio)
Transcriptional Regulation by TP53 (Danio rerio)
TP53 Regulates Transcription of DNA Repair Genes (Danio rerio)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Danio rerio)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Danio rerio)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
RNA Polymerase II Pre-transcription Events (Danio rerio)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Danio rerio)
Paused processive elongation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Abortive termination of elongation after arrest (Danio rerio)
Aborted elongation complex after arrest [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Resumption of elongation after recovery from pausing (Danio rerio)
Paused processive elongation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
TFIIS-mediated recovery of elongation from arrest (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
RNA Polymerase II Transcription Elongation (Danio rerio)
Addition of nucleotides leads to transcript elongation (Danio rerio)
Elongation complex [nucleoplasm] (Danio rerio)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Pol II elongation complex moves on the template as transcript elongates (Danio rerio)
Elongation complex prior to separation [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Separation of elongating transcript from template (Danio rerio)
Elongation complex prior to separation [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Metabolism of RNA (Danio rerio)
Processing of Capped Intron-Containing Pre-mRNA (Danio rerio)
Formation of pre-mRNPs (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNP:CBC complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Internal Methylation of mRNA (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
mRNA 3'-end processing (Danio rerio)
mRNA Polyadenylation (Danio rerio)
Core CPA complex binds capped pre-mRNA (Danio rerio)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNP:CBC complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNP:CBC complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
PP1 dephosphorylates RNA Pol II (Danio rerio)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Danio rerio)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNP:CBC complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
mRNA Splicing (Danio rerio)
mRNA Splicing - Major Pathway (Danio rerio)
Formation of the Spliceosomal C complex containing intron lariat (Danio rerio)
Spliceosomal B* complex [nucleoplasm] (Danio rerio)
capped, methylated, polyadenylated pre-mRNP:CBC complex [nucleoplasm] (Danio rerio)
capped, methylated, polyadenylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Spliceosomal C complex [nucleoplasm] (Danio rerio)
mRNA intron lariat, 3'exon:RNA Polymerase II [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Formation of the Spliceosomal P complex and exon ligation (Danio rerio)
Spliceosomal C* complex [nucleoplasm] (Danio rerio)
mRNA intron lariat, 3'exon:RNA Polymerase II [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Spliceosomal P complex [nucleoplasm] (Danio rerio)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
mRNA Splicing - Minor Pathway (Danio rerio)
ATAC spliceosome mediated 3' splice site cleavage, exon ligation (Danio rerio)
ATAC C Complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
post exon ligation complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
ATAC spliceosome mediated Lariat formation,5' splice site cleavage (Danio rerio)
ATAC C Complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Formation of AT-AC B Complex (Danio rerio)
ATAC A Complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
ATAC B Complex [nucleoplasm] (Danio rerio)
ATAC A Complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Formation of AT-AC C complex (Danio rerio)
ATAC B Complex [nucleoplasm] (Danio rerio)
ATAC A Complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
ATAC C Complex [nucleoplasm] (Danio rerio)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
Signal Transduction (Danio rerio)
Signaling by Nuclear Receptors (Danio rerio)
ESR-mediated signaling (Danio rerio)
Estrogen-dependent gene expression (Danio rerio)
p-TEFb phosphorylates serine 2 in RNA polymerase II CTD (Danio rerio)
MYB gene:hyperphosphorylated RNA polymerase II:TFIIF:ESR1:ESTG:P-TEFb [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Danio rerio)
General
This complex/polymer has been computationally inferred (based on PANTHER) from a complex/polymer involved in an event that has been demonstrated in another species.
Participants
components
Ghost homologue of POLR2D [nucleoplasm]
(Danio rerio)
phospho-polr2a [nucleoplasm]
(Danio rerio)
polr2b [nucleoplasm]
(Danio rerio)
polr2c [nucleoplasm]
(Danio rerio)
polr2eb [nucleoplasm]
(Danio rerio)
polr2f [nucleoplasm]
(Danio rerio)
polr2g [nucleoplasm]
(Danio rerio)
polr2h [nucleoplasm]
(Danio rerio)
POLR2I [nucleoplasm]
(Danio rerio)
polr2j [nucleoplasm]
(Danio rerio)
polr2k [nucleoplasm]
(Danio rerio)
polr2l [nucleoplasm]
(Danio rerio)
Participates
as a component of
Aborted elongation complex after arrest [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Danio rerio)
Damaged dsDNA with open transcription bubble:Hyperphosphorylated RNA Pol II:TFIIH [nucleoplasm] (Danio rerio)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Inferred From
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm]
(Homo sapiens)
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